HHsearch alignment for GI: 254780341 and conserved domain: COG4171
>COG4171 SapC ABC-type antimicrobial peptide transport system, permease component [Defense mechanisms].
Probab=98.94 E-value=2.7e-08 Score=68.43 Aligned_cols=184 Identities=16% Similarity=0.239 Sum_probs=136.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH-HCCCHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999788766677642101211232-023503454420120210110000002101788999999887899999
Q gi|254780341|r 95 ETLSLVLVSTFISMFIGVPLGVLAAWYPRFY-SIIRLFLDSMQTIPTFVYLIPALVLFGLGMVPGIVATIVFSIPTSVRL 173 (281)
Q Consensus 95 ~Tl~~~~~~~~ia~~igiplGi~~~~~~~~~-~~~~p~l~~~~~iP~~v~l~p~i~~fG~g~~~~i~a~~i~~~~pi~~~ 173 (281)
T Consensus 97 ~t~G~allvt~~a~l~g~~lGi~AG~t~gl~s~~lnHilDt~lSiPsLLlAiivvaf~gpsl~namfA~~LAllPrfirs 176 (296)
T COG4171 97 PTVGGALLVTLAATICGGVLGIFAGATHGLRSAVLNHILDTLLSIPSLLLAIIVVAFAGPSLSNAMFAVWLALLPRFIRS 176 (296)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 23413999999999999999999977777899999999999973589999999999608328889999999999999999
Q ss_pred HHHHHH-CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CC----CCHHHHHHHHH
Q ss_conf 588741-299899999996078820101223688626799999999999999999999997--05----88049999999
Q gi|254780341|r 174 TRLGII-STPPILKEAACAFGATPFQVFRKVELPFAIPQIVASLTQTIMLSLSMVVVTALV--GS----NGLGVPVLRAL 246 (281)
Q Consensus 174 t~~gl~-~v~~~~~eaa~~~Gas~~q~l~~V~lP~a~P~i~~Gi~~~~~~~l~~vvia~~i--g~----~GLG~~i~~a~ 246 (281)
T Consensus 177 iY~avh~EleKeYViaarLdGas~~~lL~~~IlPNI~~~~v~EitrAlsiAiLDI~ALgFl~LGAQ~PspEWGAMlgDsl 256 (296)
T COG4171 177 IYSAVHDELEKEYVIAARLDGASTLNLLWFAILPNITAILVTEITRALSIAILDIAALGFLDLGAQLPSPEWGAMLGDSL 256 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCC
T ss_conf 99999999887787776526766188999997251279999999999999999888861331257799946777742610
Q ss_pred HHHCHH--H----HHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 740789--8----9999999999999999999987421
Q gi|254780341|r 247 NTVDIG--R----GFESGLCIVILAIILDRLFSIPDPR 278 (281)
Q Consensus 247 ~~~~~~--~----~~~~~l~Iv~lai~lDri~~~~~~r 278 (281)
T Consensus 257 eLiY~APWTV~LPG~AI~~tvllvnl~gdG~r~Ainag 294 (296)
T COG4171 257 ELIYVAPWTVMLPGAAIMFTVLLVNLLGDGLRRAINAG 294 (296)
T ss_pred CEEEECCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 32665451114264799999999999615799999702