HHsearch alignment for GI: 254780341 and conserved domain: COG4209

>COG4209 LplB ABC-type polysaccharide transport system, permease component [Carbohydrate transport and metabolism].
Probab=98.89  E-value=1.9e-08  Score=69.30  Aligned_cols=188  Identities=20%  Similarity=0.304  Sum_probs=111.8

Q ss_pred             HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC--CHHHHHCCCHHHHHHHHCCCCC-HHHHH---HHHCCC--CH
Q ss_conf             2134844999999999999997887666776421012--1123202350345442012021-01100---000021--01
Q gi|254780341|r   84 IIKQGYWQETTETLSLVLVSTFISMFIGVPLGVLAAW--YPRFYSIIRLFLDSMQTIPTFV-YLIPA---LVLFGL--GM  155 (281)
Q Consensus        84 i~~~g~W~~~~~Tl~~~~~~~~ia~~igiplGi~~~~--~~~~~~~~~p~l~~~~~iP~~v-~l~p~---i~~fG~--g~  155 (281)
T Consensus        72 F~~~~ff~i~rNTl~~s~~~li~gf~~pI~lAillnElr~~~~kk~----~QT~~y~PhFlSWVVv~~~v~~fls~d~Gi  147 (309)
T COG4209          72 FSSPDFFIILRNTLLYSVLFLILGFPVPIILAILLNELRNKVFKKV----VQTISYLPHFLSWVVVSGFVFAFLSIDGGI  147 (309)
T ss_pred             HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHCHHEEEHHHHHHHHHHHCCCCCH
T ss_conf             7187399999999999999999953799999999999987778888----766333000210030565788763667518


Q ss_pred             HHHHHHHH------HHH----HHHHH-------------HHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             78899999------988----78999-------------99588741299899999996078820101223688626799
Q gi|254780341|r  156 VPGIVATI------VFS----IPTSV-------------RLTRLGIISTPPILKEAACAFGATPFQVFRKVELPFAIPQI  212 (281)
Q Consensus       156 ~~~i~a~~------i~~----~~pi~-------------~~t~~gl~~v~~~~~eaa~~~Gas~~q~l~~V~lP~a~P~i  212 (281)
T Consensus       148 iN~ll~~~g~~pi~fl~~~~wf~~i~i~~~vWK~~G~~SIiylAai~~Idpt~YEAA~vDGA~rwqqiwhITlP~i~P~i  227 (309)
T COG4209         148 INQLLMSLGGDPINFLTNPDWFRPIIIFSSVWKGAGWNSIIYLAAIAGIDPTLYEAAMVDGASRWQQIWHITLPAIRPLI  227 (309)
T ss_pred             HHHHHHHCCCCCEEHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHCCHHHHHHHH
T ss_conf             99999982898310215886026788789888423678899999997279999999980548877888821103231499


Q ss_pred             HHHHHHHHHHHHHHHHHHH--HH--CCCCHHHHH--------HH-HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             9999999999999999999--97--058804999--------99-99740789899999999999999999999874210
Q gi|254780341|r  213 VASLTQTIMLSLSMVVVTA--LV--GSNGLGVPV--------LR-ALNTVDIGRGFESGLCIVILAIILDRLFSIPDPRD  279 (281)
Q Consensus       213 ~~Gi~~~~~~~l~~vvia~--~i--g~~GLG~~i--------~~-a~~~~~~~~~~~~~l~Iv~lai~lDri~~~~~~r~  279 (281)
T Consensus       228 vIll----IL~iG~i~~~gFe~~yll~~~~~~~v~~vldtYVy~~gl~~Gd~s~sTAaGlf~svVg~iLl~~aN~iakr~  303 (309)
T COG4209         228 VILL----ILNIGNIFNAGFELFYLLPNPSGYDVTEVLDTYVYRGGLVTGDYSYSTAAGLFQSVVGFILLFLANRIAKRF  303 (309)
T ss_pred             HHHH----HHHHHHHHHCCHHHEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             9999----998523765372560660576687489899999998101357511899999999999999999999999970