HHsearch alignment for GI: 254780341 and conserved domain: COG4597
>COG4597 BatB ABC-type amino acid transport system, permease component [Amino acid transport and metabolism].
Probab=97.99 E-value=2.6e-05 Score=50.52 Aligned_cols=121 Identities=21% Similarity=0.212 Sum_probs=72.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCC
Q ss_conf 88999999887899999588741299899999996078820101223688626799999999999999-99999999705
Q gi|254780341|r 157 PGIVATIVFSIPTSVRLTRLGIISTPPILKEAACAFGATPFQVFRKVELPFAIPQIVASLTQTIMLSL-SMVVVTALVGS 235 (281)
Q Consensus 157 ~~i~a~~i~~~~pi~~~t~~gl~~v~~~~~eaa~~~Gas~~q~l~~V~lP~a~P~i~~Gi~~~~~~~l-~~vvia~~ig~ 235 (281)
T Consensus 268 aL~laLs~YTaaFIAEiVRaGI~~VskGQtEAa~sLGL~~~~t~RlVivPQAlRiIIPPLTSQY-LNLtKNSSLAiAIGY 346 (397)
T COG4597 268 ALFLALSFYTAAFIAEIVRAGIQAVSKGQTEAARSLGLRSSLTLRLVIVPQALRIIIPPLTSQY-LNLTKNSSLAIAIGY 346 (397)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCEEEEEEECCCCEEECCCCCHHH-HHHCCCCHHHHCCCC
T ss_conf 9999999999999999998765025766177898628997544799984110156417621888-733235423200277
Q ss_pred CCHHHHHHHHHHHHCHHHHHHH--HHHHHH--HHHHHHHHHHHHHHHCC
Q ss_conf 8804999999974078989999--999999--99999999998742105
Q gi|254780341|r 236 NGLGVPVLRALNTVDIGRGFES--GLCIVI--LAIILDRLFSIPDPRDR 280 (281)
Q Consensus 236 ~GLG~~i~~a~~~~~~~~~~~~--~l~Iv~--lai~lDri~~~~~~r~~ 280 (281)
T Consensus 347 pDlv--~vagT~lNQTGQAvEvv~i~m~vYL~lSL~tSl~MN~~N~rma 393 (397)
T COG4597 347 PDLV--AVAGTVLNQTGQAVEVVAIWMLVYLSLSLTTSLLMNWYNRRMA 393 (397)
T ss_pred CCEE--EEECEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 7668--8733022455607899999999999999999999999876543