HHsearch alignment for GI: 254780341 and conserved domain: PRK09471
>PRK09471 oppB oligopeptide transporter permease; Reviewed.
Probab=99.75 E-value=1.5e-16 Score=118.15 Aligned_cols=191 Identities=20% Similarity=0.261 Sum_probs=153.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC--CHHHHHCCCHHHHHHHHCCCCCHHHHHHHHCCC--------CH----
Q ss_conf 4999999999999997887666776421012--112320235034544201202101100000021--------01----
Q gi|254780341|r 90 WQETTETLSLVLVSTFISMFIGVPLGVLAAW--YPRFYSIIRLFLDSMQTIPTFVYLIPALVLFGL--------GM---- 155 (281)
Q Consensus 90 W~~~~~Tl~~~~~~~~ia~~igiplGi~~~~--~~~~~~~~~p~l~~~~~iP~~v~l~p~i~~fG~--------g~---- 155 (281)
T Consensus 91 ~~~lp~Tl~L~~~a~~i~~~lgi~lGi~aa~~~~~~~D~~~~~~~~~~~siP~F~la~lli~iF~~~l~~~P~~g~~~~~ 170 (306)
T PRK09471 91 ASSFPVSAKLGAAAFFLAVILGVSAGVIAALKQNTKWDYTVMGFAMTGVVIPSFVVAPLLVMIFAIILHWLPGGGWNGGA 170 (306)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH
T ss_conf 98889999999999999999999999999983475161999999999999899999999988999721763778887520
Q ss_pred ----HHHHHHHHHHHHHHHHHHHHHHHHCC-CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf ----78899999988789999958874129-9899999996078820101223688626799999999999999999999
Q gi|254780341|r 156 ----VPGIVATIVFSIPTSVRLTRLGIIST-PPILKEAACAFGATPFQVFRKVELPFAIPQIVASLTQTIMLSLSMVVVT 230 (281)
Q Consensus 156 ----~~~i~a~~i~~~~pi~~~t~~gl~~v-~~~~~eaa~~~Gas~~q~l~~V~lP~a~P~i~~Gi~~~~~~~l~~vvia 230 (281)
T Consensus 171 ~~~liLP~~~l~l~~~~~~~r~~R~~~~~~l~~dyV~~ArakGl~~~~i~~rh~lrnal~P~it~~~~~~~~ll~Gsviv 250 (306)
T PRK09471 171 LKFMILPMVALSLAYIASIARITRGSMIEVLHSNFIRTARAKGLPMRRIILRHALKPALLPVLSYMGPAFVGIITGSMVI 250 (306)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHCCHHHH
T ss_conf 78875369999999999999999999999987799999998699840073001298429999999999999984587121
Q ss_pred HH-HCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHH----HHHHHHHHHHHHHHCC
Q ss_conf 99-70588049999999740789899999999999----9999999998742105
Q gi|254780341|r 231 AL-VGSNGLGVPVLRALNTVDIGRGFESGLCIVIL----AIILDRLFSIPDPRDR 280 (281)
Q Consensus 231 ~~-ig~~GLG~~i~~a~~~~~~~~~~~~~l~Iv~l----ai~lDri~~~~~~r~~ 280 (281)
T Consensus 251 E~iF~~PGiG~l~~~Ai~~~D~p~v~g~~l~~a~~~i~~nll~Dil~~~lDPRiR 305 (306)
T PRK09471 251 ETIFGLPGIGQLFVNGALNRDYSLVLSLTILVGALTILFNAIVDVLYAVIDPKIR 305 (306)
T ss_pred HHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 0986476759999999980498999999999999999999999999997297558