HHsearch alignment for GI: 254780341 and conserved domain: PRK09494
>PRK09494 glnP glutamine ABC transporter permease protein; Reviewed.
Probab=99.80 E-value=1.4e-17 Score=124.33 Aligned_cols=193 Identities=16% Similarity=0.188 Sum_probs=146.1
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCHHHHHCCCHHHHHHHHCCCCCHHHHHHH-----HCCCC---HHHHH
Q ss_conf 449999999999999978876667764210-1211232023503454420120210110000-----00210---17889
Q gi|254780341|r 89 YWQETTETLSLVLVSTFISMFIGVPLGVLA-AWYPRFYSIIRLFLDSMQTIPTFVYLIPALV-----LFGLG---MVPGI 159 (281)
Q Consensus 89 ~W~~~~~Tl~~~~~~~~ia~~igiplGi~~-~~~~~~~~~~~p~l~~~~~iP~~v~l~p~i~-----~fG~g---~~~~i 159 (281)
T Consensus 15 ll~Gl~~Tl~l~~~s~~~g~~lG~~~a~~r~~~~~~l~~~~~~yv~~~RgtPlLv~lf~~yfglp~l~~~i~~~~~~~~v 94 (219)
T PRK09494 15 LLEGAKMTLWISVLGLAGGLVIGLLAGFARAYGGWIANHIALVFIELIRGTPIVVQVMFIYFALPMAFNDLRIDPFSAAV 94 (219)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
T ss_conf 99999999999999999999999999999988968999999999999976489999999999899854677748999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
Q ss_conf 99999887899999588741299899999996078820101223688626799999999999999999999997058804
Q gi|254780341|r 160 VATIVFSIPTSVRLTRLGIISTPPILKEAACAFGATPFQVFRKVELPFAIPQIVASLTQTIMLSLSMVVVTALVGSNGLG 239 (281)
Q Consensus 160 ~a~~i~~~~pi~~~t~~gl~~v~~~~~eaa~~~Gas~~q~l~~V~lP~a~P~i~~Gi~~~~~~~l~~vvia~~ig~~GLG 239 (281)
T Consensus 95 i~l~l~~~Ay~aEi~R~gi~sVp~GQ~EAA~alG~s~~q~~r~IilPQa~r~~lP~l~n~~i~liK~Tsl~s~Igv~El~ 174 (219)
T PRK09494 95 VTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRRETLRYVIGPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELT 174 (219)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999831879999988598988898964699879998878899999999987999999899999
Q ss_pred HHHHHH-HHHHCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 999999-974078989999-999999999999999987421059
Q gi|254780341|r 240 VPVLRA-LNTVDIGRGFES-GLCIVILAIILDRLFSIPDPRDRI 281 (281)
Q Consensus 240 ~~i~~a-~~~~~~~~~~~~-~l~Iv~lai~lDri~~~~~~r~~~ 281 (281)
T Consensus 175 ~~a~~i~~~t~~~~e~~~~~a~iY~~l~~~l~~~~~~lErrl~i 218 (219)
T PRK09494 175 RQGQEIIAGNFRALEIWSAVAVIYLIITLVLSFILRRLERRMKI 218 (219)
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999997107189999999999999999999999999987714