HHsearch alignment for GI: 254780341 and conserved domain: PRK09500

>PRK09500 potC spermidine/putrescine ABC transporter membrane protein; Reviewed.
Probab=99.87  E-value=3.1e-20  Score=140.26  Aligned_cols=197  Identities=23%  Similarity=0.290  Sum_probs=161.0

Q ss_pred             HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH-HHHHCCCHHHHHHHHCCCCCHHHHHHHHC---C--CCHHH
Q ss_conf             213484499999999999999788766677642101211-23202350345442012021011000000---2--10178
Q gi|254780341|r   84 IIKQGYWQETTETLSLVLVSTFISMFIGVPLGVLAAWYP-RFYSIIRLFLDSMQTIPTFVYLIPALVLF---G--LGMVP  157 (281)
Q Consensus        84 i~~~g~W~~~~~Tl~~~~~~~~ia~~igiplGi~~~~~~-~~~~~~~p~l~~~~~iP~~v~l~p~i~~f---G--~g~~~  157 (281)
T Consensus        51 f~~~~~~~~~~nSl~ia~~~~~~~~~lg~~~A~~l~r~~~~~~~~~~~l~~~p~~~P~~v~~i~l~~~~~~~g~~~~~~~  130 (257)
T PRK09500         51 MNNDSLLQAAQHSLTMAVFSATFATLIGSLTAVALYRYRFRGKKFVSGMLFVVMMSPDIVMAISLLVLFMLLGIQLGFWS  130 (257)
T ss_pred             HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
T ss_conf             87937999999999999999999999999999999752677456999999999997999999999999997351320999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-
Q ss_conf             8999999887899999588741299899999996078820101223688626799999999999999999999997058-
Q gi|254780341|r  158 GIVATIVFSIPTSVRLTRLGIISTPPILKEAACAFGATPFQVFRKVELPFAIPQIVASLTQTIMLSLSMVVVTALVGSN-  236 (281)
Q Consensus       158 ~i~a~~i~~~~pi~~~t~~gl~~v~~~~~eaa~~~Gas~~q~l~~V~lP~a~P~i~~Gi~~~~~~~l~~vvia~~ig~~-  236 (281)
T Consensus       131 lil~~~~~~lP~~~~~i~~~l~~i~~~l~EAA~~lGAs~~~~f~~VilPl~~P~i~~~~il~F~~s~~ef~~~~~l~g~~  210 (257)
T PRK09500        131 LLFAHITFCLPFVVVTVYSRLKGFDVRMLEAAKDLGASEVTILRKIILPLAMPAVAAGWLLSFTLSMDDVVVSSFVTGPS  210 (257)
T ss_pred             HHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf             99888885150279999999971796999999872999879636312984799999999999999999999999752899


Q ss_pred             --CHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             --80499999997407898999999999999999999998742105
Q gi|254780341|r  237 --GLGVPVLRALNTVDIGRGFESGLCIVILAIILDRLFSIPDPRDR  280 (281)
Q Consensus       237 --GLG~~i~~a~~~~~~~~~~~~~l~Iv~lai~lDri~~~~~~r~~  280 (281)
T Consensus       211 ~~tlp~~i~~~~~~~~~~~~~Ala~il~~i~~~~~~l~~~l~r~~~  256 (257)
T PRK09500        211 YEILPLKIYSMVKVGVSPEVNALATILLVLSLVLVILSQLLARDKT  256 (257)
T ss_pred             CEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf             6028999999987378759999999999999999999999866547