HHsearch alignment for GI: 254780341 and conserved domain: PRK09881

>PRK09881 ATP-dependent peptide transporter membrane subunit; Provisional.
Probab=99.73  E-value=1.1e-15  Score=112.96  Aligned_cols=188  Identities=23%  Similarity=0.303  Sum_probs=145.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHCCCC-HHHHHCCCHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             99999999999978876667764210121-12320235034544201202101100000021017889999998878999
Q gi|254780341|r   93 TTETLSLVLVSTFISMFIGVPLGVLAAWY-PRFYSIIRLFLDSMQTIPTFVYLIPALVLFGLGMVPGIVATIVFSIPTSV  171 (281)
Q Consensus        93 ~~~Tl~~~~~~~~ia~~igiplGi~~~~~-~~~~~~~~p~l~~~~~iP~~v~l~p~i~~fG~g~~~~i~a~~i~~~~pi~  171 (281)
T Consensus        93 ~r~sL~i~l~~~~i~~~iG~~lG~~aGy~gG~~D~il~ri~Dv~~aiP~lll~i~l~~~~g~~~~~~il~i~l~~w~~~a  172 (296)
T PRK09881         93 SQQSILAGLVVVAIAGMIGSLLGCLSGVLGGRADAIIMRIMDIMLSIPSLVLTMALAAALGPSLFNAMLAIAIVRIPFYV  172 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
T ss_conf             99999999999999999999999988881760766556777630158605777888765167516888999998799999


Q ss_pred             HHHHH-HHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC------CCHHHHHHH
Q ss_conf             99588-74129989999999607882010122368862679999999999999999999999705------880499999
Q gi|254780341|r  172 RLTRL-GIISTPPILKEAACAFGATPFQVFRKVELPFAIPQIVASLTQTIMLSLSMVVVTALVGS------NGLGVPVLR  244 (281)
Q Consensus       172 ~~t~~-gl~~v~~~~~eaa~~~Gas~~q~l~~V~lP~a~P~i~~Gi~~~~~~~l~~vvia~~ig~------~GLG~~i~~  244 (281)
T Consensus       173 R~vR~~~l~i~~~~yV~AAr~~G~s~~~Ii~rhiLPni~~~liv~~~~~~~~aIl~ea~LsFLGlG~~pp~~sWG~mi~~  252 (296)
T PRK09881        173 RLARGQALVVRQYTYVQAAKTFGASRWHLINWHILRNSLPPLIVQASLDIGSAILMAATLGFIGLGAQQPSAEWGAMVAN  252 (296)
T ss_pred             HHHHHHHHHHHCCHHHHHHHHCCCCHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
T ss_conf             99999999996349999999839886785414276661889999999999999999999999037899999859999999


Q ss_pred             HHHHHC--HHHHHHHHHHHHHHHH----HHHHHHHHHHHHCC
Q ss_conf             997407--8989999999999999----99999998742105
Q gi|254780341|r  245 ALNTVD--IGRGFESGLCIVILAI----ILDRLFSIPDPRDR  280 (281)
Q Consensus       245 a~~~~~--~~~~~~~~l~Iv~lai----~lDri~~~~~~r~~  280 (281)
T Consensus       253 ~~~~~~~~~w~~~~Pg~~i~l~vl~~nllgdgLrd~ldPr~r  294 (296)
T PRK09881        253 GRNYVLDQWWYCAFPGAAILLTAVGFNLFGDGIRDLLDPKAG  294 (296)
T ss_pred             HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf             999998772999999999999999999999999998196557