HHsearch alignment for GI: 254780341 and conserved domain: PRK10592
>PRK10592 putrescine transporter subunit: membrane component of ABC superfamily; Provisional.
Probab=99.85 E-value=1.1e-19 Score=136.94 Aligned_cols=196 Identities=18% Similarity=0.246 Sum_probs=152.9
Q ss_pred HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC--HHHHHCCCHHHHHHHHCCCCCHHHHHHHHCC---------
Q ss_conf 21348449999999999999978876667764210121--1232023503454420120210110000002---------
Q gi|254780341|r 84 IIKQGYWQETTETLSLVLVSTFISMFIGVPLGVLAAWY--PRFYSIIRLFLDSMQTIPTFVYLIPALVLFG--------- 152 (281)
Q Consensus 84 i~~~g~W~~~~~Tl~~~~~~~~ia~~igiplGi~~~~~--~~~~~~~~p~l~~~~~iP~~v~l~p~i~~fG--------- 152 (281)
T Consensus 56 f~~~~~~~a~~~Sl~ia~~~t~i~~~lG~~~A~~l~r~~~~~g~~~~~~l~~~Pl~vP~iv~gl~l~~~f~~~g~~~g~~ 135 (281)
T PRK10592 56 FRDDAMMSAVGLSLTIAACAATMAAILGTIAAVVMVRFGRFRGSNGFAFMITAPLVMPDVITGLSLLLLFVALGHAIGWP 135 (281)
T ss_pred HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 77978999999999999999999999999999999980553306999999998998678999999999999846322532
Q ss_pred --CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf --101788999999887899999588741299899999996078820101223688626799999999999999999999
Q gi|254780341|r 153 --LGMVPGIVATIVFSIPTSVRLTRLGIISTPPILKEAACAFGATPFQVFRKVELPFAIPQIVASLTQTIMLSLSMVVVT 230 (281)
Q Consensus 153 --~g~~~~i~a~~i~~~~pi~~~t~~gl~~v~~~~~eaa~~~Gas~~q~l~~V~lP~a~P~i~~Gi~~~~~~~l~~vvia 230 (281)
T Consensus 136 ~~~~~~~i~i~~~~~~~P~~~~~i~a~l~~id~~leEAA~~LGAs~~~~f~~V~LPli~Pgiiag~il~F~~s~~ef~~~ 215 (281)
T PRK10592 136 ADRGMLTIWLAHVTFCTAYVAVVISSRLRELDRSIEEAAMDLGATPLKVFFVITLPMIMPAIISGWLLAFTLSLDDLVIA 215 (281)
T ss_pred HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 00237899999999999999999999998589279999988199988883435417115989999999999999877788
Q ss_pred HHHCCC---CHHHHHHHHHHHHCHHHHHHHH-HH---HHHHHHHHHHHHHHHHHHC
Q ss_conf 997058---8049999999740789899999-99---9999999999999874210
Q gi|254780341|r 231 ALVGSN---GLGVPVLRALNTVDIGRGFESG-LC---IVILAIILDRLFSIPDPRD 279 (281)
Q Consensus 231 ~~ig~~---GLG~~i~~a~~~~~~~~~~~~~-l~---Iv~lai~lDri~~~~~~r~ 279 (281)
T Consensus 216 ~~l~g~~~~TLpv~iy~~~~~~~~p~~~A~~~l~~~v~~~~~~ia~~l~~R~~k~r 271 (281)
T PRK10592 216 SFVSGPGATTLPMLVFSSVRMGVNPEINALATLILGVVGIVGFIAWYLMARAEKQR 271 (281)
T ss_pred HHEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 62108998456999999987179879999999999999999999999998889887