HHsearch alignment for GI: 254780341 and conserved domain: PRK10683
>PRK10683 putrescine transporter subunit: membrane component of ABC superfamily; Provisional.
Probab=99.86 E-value=1.2e-19 Score=136.80 Aligned_cols=196 Identities=18% Similarity=0.231 Sum_probs=139.1
Q ss_pred HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH-HHHCCCHHHHHHHHCCCCCHHHHHH-------------H
Q ss_conf 2134844999999999999997887666776421012112-3202350345442012021011000-------------0
Q gi|254780341|r 84 IIKQGYWQETTETLSLVLVSTFISMFIGVPLGVLAAWYPR-FYSIIRLFLDSMQTIPTFVYLIPAL-------------V 149 (281)
Q Consensus 84 i~~~g~W~~~~~Tl~~~~~~~~ia~~igiplGi~~~~~~~-~~~~~~p~l~~~~~iP~~v~l~p~i-------------~ 149 (281)
T Consensus 90 f~d~~y~~a~~nSL~iA~~sT~i~lliG~P~Ay~iar~~~~~r~~l~~lvilP~~~s~lVr~~aw~~iL~~~G~ln~~L~ 169 (317)
T PRK10683 90 TDDPLYFDAYLQSLQVAAISTICCLLIGYPLAWAVAHSKPSTRNILLLLVILPSWTSFLIRVYAWMGILKNNGVLNNFLL 169 (317)
T ss_pred HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
T ss_conf 76978999999999999999999999999999999938861789999999999706799999999999731434878999
Q ss_pred HCCC---------CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 0021---------0178899999988789999958874129989999999607882010122368862679999999999
Q gi|254780341|r 150 LFGL---------GMVPGIVATIVFSIPTSVRLTRLGIISTPPILKEAACAFGATPFQVFRKVELPFAIPQIVASLTQTI 220 (281)
Q Consensus 150 ~fG~---------g~~~~i~a~~i~~~~pi~~~t~~gl~~v~~~~~eaa~~~Gas~~q~l~~V~lP~a~P~i~~Gi~~~~ 220 (281)
T Consensus 170 ~lGli~~pl~ll~t~~aViig~v~~~lPfmvL~l~a~L~~id~~L~EAA~~LGAs~~~~F~~VtLPL~~PGIiag~lLvF 249 (317)
T PRK10683 170 WLGVIDQPLTILHTNLAVYIGIVYAYLPFMVLPIYTALTRIDYSLVEAALDLGARPLKTFFSVIVPLTKGGIIAGSMLVF 249 (317)
T ss_pred HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHEEEEECCCHHHHHHHHHHHH
T ss_conf 96044676322564589999999999999999999999858908999998769986554002320621899999999999
Q ss_pred HHHHHHHHHHHHHCCC---CHHHHHHHH-HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 9999999999997058---804999999-9740789899999999999999999999874210
Q gi|254780341|r 221 MLSLSMVVVTALVGSN---GLGVPVLRA-LNTVDIGRGFESGLCIVILAIILDRLFSIPDPRD 279 (281)
Q Consensus 221 ~~~l~~vvia~~ig~~---GLG~~i~~a-~~~~~~~~~~~~~l~Iv~lai~lDri~~~~~~r~ 279 (281)
T Consensus 250 i~a~g~F~iP~lLGG~~~~~i~~~i~~~f~~~~dwp~aaAlavvLl~i~iv~~~~~~r~~~k~ 312 (317)
T PRK10683 250 IPAVGEFVIPELLGGPDSIMIGRVLWQEFFNNRDWPVASAVAIIMLLLLIVPIMWFHKHQQKS 312 (317)
T ss_pred HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999888776866429985629999999998746805899999999999999999999998874