HHsearch alignment for GI: 254780341 and conserved domain: PRK10914
>PRK10914 dipeptide transporter permease DppB; Provisional.
Probab=99.73 E-value=5e-16 Score=114.99 Aligned_cols=190 Identities=22% Similarity=0.245 Sum_probs=150.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCC--CHHHHHCCCHHHHHHHHCCCCCHHHHHHHHCCC--------C-------
Q ss_conf 99999999999997887666776421012--112320235034544201202101100000021--------0-------
Q gi|254780341|r 92 ETTETLSLVLVSTFISMFIGVPLGVLAAW--YPRFYSIIRLFLDSMQTIPTFVYLIPALVLFGL--------G------- 154 (281)
Q Consensus 92 ~~~~Tl~~~~~~~~ia~~igiplGi~~~~--~~~~~~~~~p~l~~~~~iP~~v~l~p~i~~fG~--------g------- 154 (281)
T Consensus 95 ~lp~Tl~L~~~a~il~~~igi~lGi~aa~~~~~~~D~~~~~~~~~~~siP~F~lallli~if~~~l~~~P~~G~~~~~~~ 174 (339)
T PRK10914 95 RFKATLELGVCAMIFATAVGIPVGVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVF 174 (339)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 27258999999999999999999999998527511136788898612306999999999999999574777676765312
Q ss_pred -------------------H-----------HHHHHHHHHHHHHHHHHHHHHHHHC-CCHHHHHHHHHCCCCHHHHHHHH
Q ss_conf -------------------1-----------7889999998878999995887412-99899999996078820101223
Q gi|254780341|r 155 -------------------M-----------VPGIVATIVFSIPTSVRLTRLGIIS-TPPILKEAACAFGATPFQVFRKV 203 (281)
Q Consensus 155 -------------------~-----------~~~i~a~~i~~~~pi~~~t~~gl~~-v~~~~~eaa~~~Gas~~q~l~~V 203 (281)
T Consensus 175 ~~~~~p~~g~~~~~~~~~g~~~~~~~~l~hliLP~l~L~l~~~a~~~r~~R~~~~~~l~~dyV~~ArakGl~~~~i~~~h 254 (339)
T PRK10914 175 LDDSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAKGLTRMRVIIVH 254 (339)
T ss_pred CCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEHHH
T ss_conf 46666655410011142045113788999999999999999999999999999999983499999998594933140498
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCCCCHHHHHHHHHHHHCHHHHHHHHHHHHH----HHHHHHHHHHHHHHH
Q ss_conf 68862679999999999999999999999-7058804999999974078989999999999----999999999987421
Q gi|254780341|r 204 ELPFAIPQIVASLTQTIMLSLSMVVVTAL-VGSNGLGVPVLRALNTVDIGRGFESGLCIVI----LAIILDRLFSIPDPR 278 (281)
Q Consensus 204 ~lP~a~P~i~~Gi~~~~~~~l~~vvia~~-ig~~GLG~~i~~a~~~~~~~~~~~~~l~Iv~----lai~lDri~~~~~~r 278 (281)
T Consensus 255 ~lrnal~P~it~~g~~~~~ll~GsvivE~vF~~pGiG~l~~~Ai~~rD~pvi~g~~l~~~~~~i~~nli~Dil~~~lDPR 334 (339)
T PRK10914 255 ALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPR 334 (339)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 39860998999999999999976999869867757699999999835889999999999999999999999999862840
Q ss_pred CCC
Q ss_conf 059
Q gi|254780341|r 279 DRI 281 (281)
Q Consensus 279 ~~~ 281 (281)
T Consensus 335 iR~ 337 (339)
T PRK10914 335 IRH 337 (339)
T ss_pred CCC
T ss_conf 478