HHsearch alignment for GI: 254780341 and conserved domain: PRK10998
>PRK10998 malG maltose transporter permease; Provisional.
Probab=99.62 E-value=1e-13 Score=100.99 Aligned_cols=182 Identities=18% Similarity=0.199 Sum_probs=131.7
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH-HHHCCCHHHHHHHHCCCCCHHHHHHHHC---C-------CCHHH
Q ss_conf 44999999999999997887666776421012112-3202350345442012021011000000---2-------10178
Q gi|254780341|r 89 YWQETTETLSLVLVSTFISMFIGVPLGVLAAWYPR-FYSIIRLFLDSMQTIPTFVYLIPALVLF---G-------LGMVP 157 (281)
Q Consensus 89 ~W~~~~~Tl~~~~~~~~ia~~igiplGi~~~~~~~-~~~~~~p~l~~~~~iP~~v~l~p~i~~f---G-------~g~~~ 157 (281)
T Consensus 81 ~~~~~~NSl~va~~~~v~~l~~~~~aaYalar~~f~g~~~l~~~~l~~~~iP~~~~~ip~~~~~~~lgl~~~~~~l~t~~ 160 (296)
T PRK10998 81 VLLWLWNSVKIAGITAIGIVALSTTCAYAFARMRFPGKATLLKGMLIFQMFPAVLSLVALYALFDRLGQYIPFIGLNTHG 160 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
T ss_conf 89999999999999999999999999998731215558999999999999889999999999999960202201332249
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCC
Q ss_conf 8999999887899999588741299899999996078820101223688626799999999999999999999997-058
Q gi|254780341|r 158 GIVATIVFSIPTSVRLTRLGIISTPPILKEAACAFGATPFQVFRKVELPFAIPQIVASLTQTIMLSLSMVVVTALV-GSN 236 (281)
Q Consensus 158 ~i~a~~i~~~~pi~~~t~~gl~~v~~~~~eaa~~~Gas~~q~l~~V~lP~a~P~i~~Gi~~~~~~~l~~vvia~~i-g~~ 236 (281)
T Consensus 161 ~ii~~~~~~~~~~i~ll~~ff~~iP~el~EAA~iDGas~~~~f~~IilPl~~P~i~t~~i~~fi~~WNef~~~ll~l~~~ 240 (296)
T PRK10998 161 GVIFAYLGGIALHVWTIKGYFETIDSSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLLRDV 240 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 99999999999999999999862979899999985997777978767862599999999999999999999999990895
Q ss_pred -----CHHHHHHHHHHHHCHHHHHHHHHH----HHHHHHHHHH
Q ss_conf -----804999999974078989999999----9999999999
Q gi|254780341|r 237 -----GLGVPVLRALNTVDIGRGFESGLC----IVILAIILDR 270 (281)
Q Consensus 237 -----GLG~~i~~a~~~~~~~~~~~~~l~----Iv~lai~lDr 270 (281)
T Consensus 241 ~~~tl~v~l~~~~~~~~~~~g~~~A~~~i~~lP~lI~f~~~qr 283 (296)
T PRK10998 241 NSYTLAVGMQQYLNPQNYLWGDFAAAAVLSALPITLVFLLAQR 283 (296)
T ss_pred CCEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 4300999999986623564999999999999999999999999