HHsearch alignment for GI: 254780341 and conserved domain: TIGR03226
>TIGR03226 PhnU 2-aminoethylphosphonate ABC transporter, permease protein. This ABC transporter permease (membrane-spanning) component is found in a region of the salmonella typhimurium LT2 genome responsible for the catabolism of 2-aminoethylphosphonate via the phnWX pathway (GenProp0238).
Probab=99.89 E-value=1.1e-20 Score=143.09 Aligned_cols=198 Identities=21% Similarity=0.339 Sum_probs=156.2
Q ss_pred HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH-HHHHCCCHHHHHHHHCCCCCHHHHHHHHC----------
Q ss_conf 2213484499999999999999788766677642101211-23202350345442012021011000000----------
Q gi|254780341|r 83 LIIKQGYWQETTETLSLVLVSTFISMFIGVPLGVLAAWYP-RFYSIIRLFLDSMQTIPTFVYLIPALVLF---------- 151 (281)
Q Consensus 83 ~i~~~g~W~~~~~Tl~~~~~~~~ia~~igiplGi~~~~~~-~~~~~~~p~l~~~~~iP~~v~l~p~i~~f---------- 151 (281)
T Consensus 84 ~f~~~~~~~al~nTl~~a~~~t~~~lvlG~~lA~~L~r~~f~g~~~l~~ll~lp~~lP~~v~a~a~~~l~~~~G~ln~~L 163 (312)
T TIGR03226 84 FFASHDFRDALGNTLQIAFAAAAGALLLGSALAAILFFIPFPGAELIGRFLDLFIAFPSFLIAFAFIFIYGSAGLLNGAL 163 (312)
T ss_pred HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
T ss_conf 97796799999999999999999999999999999996237628999999999999889999999999983577077999
Q ss_pred ----CC---------CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf ----21---------01788999999887899999588741299899999996078820101223688626799999999
Q gi|254780341|r 152 ----GL---------GMVPGIVATIVFSIPTSVRLTRLGIISTPPILKEAACAFGATPFQVFRKVELPFAIPQIVASLTQ 218 (281)
Q Consensus 152 ----G~---------g~~~~i~a~~i~~~~pi~~~t~~gl~~v~~~~~eaa~~~Gas~~q~l~~V~lP~a~P~i~~Gi~~ 218 (281)
T Consensus 164 ~~l~gl~~~p~~~l~s~~gVvla~i~~~~Pf~~l~~~a~l~~id~~l~EAA~~lGAs~~~~Fr~VtLPll~P~i~ag~lL 243 (312)
T TIGR03226 164 MRAFAFDAPPLDFLFGAGGVILAEITFFTPFVMRPLLAAFAQIDKRLLEAASILGAHGLMLAGQVIFPAALPAIAAGGIL 243 (312)
T ss_pred HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99628667745777409999999999989999999999999689789999988499988867874278468999999999
Q ss_pred HHHHHHHHHHHHHHHCCC---CHHHHHHH-HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 999999999999997058---80499999-997407898999999999999999999998742105
Q gi|254780341|r 219 TIMLSLSMVVVTALVGSN---GLGVPVLR-ALNTVDIGRGFESGLCIVILAIILDRLFSIPDPRDR 280 (281)
Q Consensus 219 ~~~~~l~~vvia~~ig~~---GLG~~i~~-a~~~~~~~~~~~~~l~Iv~lai~lDri~~~~~~r~~ 280 (281)
T Consensus 244 ~Fi~~~~~F~~~~~lgg~~~~tl~~~Iy~~~~~~~d~~~AaAlavillv~~l~l~~l~r~~~rR~~ 309 (312)
T TIGR03226 244 CFLLTLNEFGILLFIGAAGLITLPMAIYSKAILDIDLPAAAAGALIMIALSLALFALYRLAARRAG 309 (312)
T ss_pred HHHHHHHHHCCEEEEECCCCEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 999999775411344089970179999999987579899999999999999999999999987634