HHsearch alignment of GI: 254780341 and MMDB domain: 3dhw_A_
>3dhw_A (A:) D-methionine transport system permease protein METI; ABC-transporter, methionine uptake transporter, membrane protein, amino-acid transport; 3.70A {Escherichia coli K12}
Probab=99.92 E-value=9.2e-25 Score=167.15 Aligned_cols=191 Identities=28% Similarity=0.383 Sum_probs=158.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH--------HHHHCCCHHHHHHHHCCCCCHHHHHH------HHCCC
Q ss_conf 84499999999999999788766677642101211--------23202350345442012021011000------00021
Q gi|254780341|r 88 GYWQETTETLSLVLVSTFISMFIGVPLGVLAAWYP--------RFYSIIRLFLDSMQTIPTFVYLIPAL------VLFGL 153 (281)
Q Consensus 88 g~W~~~~~Tl~~~~~~~~ia~~igiplGi~~~~~~--------~~~~~~~p~l~~~~~iP~~v~l~p~i------~~fG~ 153 (281)
.+|+...+|+.....++.++.++|+++|+.+++++ +......+....++.+|.++++.... ..++.
T Consensus 8 ~l~~~l~~tl~~~~~~~~i~~vig~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (217)
T 3dhw_A 8 LLVRGVWETLAMTFVSGFFGFVIGLPVGVLLYVTRPGQIIANAKLYRTVSAIVNIFRSIPFIILLVWMIPFTRVIVGTSI 87 (217)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTGGGGGGGGGGTTCSSSCCSSHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHTTCCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 99999999999999999999999999999999987344320189999999999999999999999999986455204530
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 01788999999887899999588741299899999996078820101223688626799999999999999999999997
Q gi|254780341|r 154 GMVPGIVATIVFSIPTSVRLTRLGIISTPPILKEAACAFGATPFQVFRKVELPFAIPQIVASLTQTIMLSLSMVVVTALV 233 (281)
Q Consensus 154 g~~~~i~a~~i~~~~pi~~~t~~gl~~v~~~~~eaa~~~Gas~~q~l~~V~lP~a~P~i~~Gi~~~~~~~l~~vvia~~i 233 (281)
+..+.+++..+++.|++.+++.++++++|+++.|+|+++|+|+||+++||.+|+++|.+++|+..+.+.++....++|++
T Consensus 88 ~~~~~ii~~~~~~~~~i~~~~~~~l~~i~~~~~eaA~~lG~s~~q~~~~v~lP~~~p~i~~~~~~~~~~~~~~~~~~~~i 167 (217)
T 3dhw_A 88 GLQAAIVPLTVGAAPFIARMVENALLEIPTGLIEASRAMGATPMQIVRKVLLPEALPGLVNAATITLITLVGYSAMGGAV 167 (217)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTTTTHHHHHTCCTHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHCCST
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 18899898899724689899998888615027788860698742142673099769999999999999999999999999
Q ss_pred CCCCHHHHHHH-HHHHHCHHHHHHHHHHHHHHHH----HHHHHHHHHHHH
Q ss_conf 05880499999-9974078989999999999999----999999987421
Q gi|254780341|r 234 GSNGLGVPVLR-ALNTVDIGRGFESGLCIVILAI----ILDRLFSIPDPR 278 (281)
Q Consensus 234 g~~GLG~~i~~-a~~~~~~~~~~~~~l~Iv~lai----~lDri~~~~~~r 278 (281)
|.+|+|+.... +.+.+|.+......+...++.+ +.|++.++.+||
T Consensus 168 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~l~~~~~rR 217 (217)
T 3dhw_A 168 GAGGLGQIGYQYGYIGYNATVMNTVLVLLVILVYLIQFAGDRIVRAVTRK 217 (217)
T ss_dssp TCCHHHHHHHHHHHSSCCTTHHHHHHHHHHHHHHHHHHHCC---------
T ss_pred HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 87599999999999750189999999999999999999999999985699