HHsearch results for GI: 254780341 and protein with PDBid: 3d31_C

>3d31_C Sulfate/molybdate ABC transporter, permease protein; ATP-binding, nucleotide-binding, membrane, transmembrane, transport protein; 3.00A {Methanosarcina acetivorans} SCOP: f.58.1.1
Probab=99.90  E-value=6e-22  Score=149.30  Aligned_cols=198  Identities=18%  Similarity=0.223  Sum_probs=152.8

Q ss_pred             HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH-HHHHCCCHHHHHHHHCCCCCHHHHHHHHCC---------
Q ss_conf             2213484499999999999999788766677642101211-232023503454420120210110000002---------
Q gi|254780341|r   83 LIIKQGYWQETTETLSLVLVSTFISMFIGVPLGVLAAWYP-RFYSIIRLFLDSMQTIPTFVYLIPALVLFG---------  152 (281)
Q Consensus        83 ~i~~~g~W~~~~~Tl~~~~~~~~ia~~igiplGi~~~~~~-~~~~~~~p~l~~~~~iP~~v~l~p~i~~fG---------  152 (281)
                      ...+.++|+...+|+.....+++++.++|+++|+++++++ +.++.++.+......+|+.+...+...+++         
T Consensus        74 ~~~~~~~~~~i~~Tl~~a~~s~~i~~ilg~~~a~~l~~~~~~~~~~~~~l~~~p~~~p~~v~~~~~~~~~~~~g~~~~~~  153 (295)
T 3d31_C           74 AAGNRSVISSIFLSLYAGFLATLLALLLGAPTGYILARFDFPGKRLVESIIDVPVVVPHTVAGIALLTVFGSRGLIGEPL  153 (295)
T ss_dssp             HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCTTHHHHHHHHHGGGTSCHHHHHHHHHHHHSTTSTTTGGG
T ss_pred             HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
T ss_conf             98598999999999999999999999999999999996454358999999999999998889999999861246533210


Q ss_pred             -------CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             -------1017889999998878999995887412998999999960788201012236886267999999999999999
Q gi|254780341|r  153 -------LGMVPGIVATIVFSIPTSVRLTRLGIISTPPILKEAACAFGATPFQVFRKVELPFAIPQIVASLTQTIMLSLS  225 (281)
Q Consensus       153 -------~g~~~~i~a~~i~~~~pi~~~t~~gl~~v~~~~~eaa~~~Gas~~q~l~~V~lP~a~P~i~~Gi~~~~~~~l~  225 (281)
                             .+..+.+++.+.+.+|...+....+++++|+|+.|+|+++|+|+||+++||.+|.+.|.+++++..+...++.
T Consensus       154 ~~~~~~~~~~~~iii~~~~~~~p~~~~~~~~~l~~i~~~~~eAA~~~Gas~~~~~~~IiLP~~~p~i~~~~~l~f~~~~~  233 (295)
T 3d31_C          154 ESYIQFRDALPGIVVAMLFVSMPYLANSAREGFKSVDPRLENAARSLGAPLWKAFFFVTLPLSARYLLIGSVMTWARAIS  233 (295)
T ss_dssp             TTTCCCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHTTCCHHHHHHHTHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             10267125789999999998074432015788873152699999984999366323533998999999999999999999


Q ss_pred             HHHHHHHHCCC--CHHHHHHHHHHHHCHHHHHHHHHHHHHHHH----HHHHHHHHHHHHCC
Q ss_conf             99999997058--804999999974078989999999999999----99999998742105
Q gi|254780341|r  226 MVVVTALVGSN--GLGVPVLRALNTVDIGRGFESGLCIVILAI----ILDRLFSIPDPRDR  280 (281)
Q Consensus       226 ~vvia~~ig~~--GLG~~i~~a~~~~~~~~~~~~~l~Iv~lai----~lDri~~~~~~r~~  280 (281)
                      ...+.+++|.+  -+...++...+..|.+.+.+..+...++.+    +...+.+...+|+|
T Consensus       234 ~f~~~~~l~~~~~~~~~~i~~~~~~~~~~~a~a~a~il~ii~l~i~~~~~~L~~~~~~~~r  294 (295)
T 3d31_C          234 EFGAVVILAYYPMVGPTLIYDRFISYGLSASRPIAVLLILVTLSIFLVIRTLSAGWSIYDR  294 (295)
T ss_dssp             CCHHHHHHHCTTCCHHHHHHHHHHHSTTTTTHHHHHHHHHHHHHHHHHHC-----------
T ss_pred             HHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCC
T ss_conf             9999998848973499999999993489999999999999999999999999974503357