HHsearch results for GI: 254780341 and protein with PDBid: 3dhw_A
>3dhw_A D-methionine transport system permease protein METI; ABC-transporter, methionine uptake transporter, membrane protein, amino-acid transport; 3.70A {Escherichia coli K12} SCOP: f.58.1.1
Probab=99.94 E-value=4.3e-26 Score=174.24 Aligned_cols=190 Identities=27% Similarity=0.388 Sum_probs=154.6
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC--------HHHHHCCCHHHHHHHHCCCCCHHHH---H---HHHCCCC
Q ss_conf 449999999999999978876667764210121--------1232023503454420120210110---0---0000210
Q gi|254780341|r 89 YWQETTETLSLVLVSTFISMFIGVPLGVLAAWY--------PRFYSIIRLFLDSMQTIPTFVYLIP---A---LVLFGLG 154 (281)
Q Consensus 89 ~W~~~~~Tl~~~~~~~~ia~~igiplGi~~~~~--------~~~~~~~~p~l~~~~~iP~~v~l~p---~---i~~fG~g 154 (281)
+++...+|+.....++.++.++|+|+|+++++. ++.++...++.+.++++|..+++.. . ...++.|
T Consensus 9 ~l~~~~~Tl~~a~~~~~~~~~ig~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~~~~~ 88 (217)
T 3dhw_A 9 LVRGVWETLAMTFVSGFFGFVIGLPVGVLLYVTRPGQIIANAKLYRTVSAIVNIFRSIPFIILLVWMIPFTRVIVGTSIG 88 (217)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTGGGGGGGGGGTTCSSSCCSSHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHTTCCSSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999864443200899999999999999999999999999999999861236
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 17889999998878999995887412998999999960788201012236886267999999999999999999999970
Q gi|254780341|r 155 MVPGIVATIVFSIPTSVRLTRLGIISTPPILKEAACAFGATPFQVFRKVELPFAIPQIVASLTQTIMLSLSMVVVTALVG 234 (281)
Q Consensus 155 ~~~~i~a~~i~~~~pi~~~t~~gl~~v~~~~~eaa~~~Gas~~q~l~~V~lP~a~P~i~~Gi~~~~~~~l~~vvia~~ig 234 (281)
..+.+++..+++.|++.+++.+|++++|+++.|+||++|+|+||+++||.+|++.|++++|...+.+.++....+++++|
T Consensus 89 ~~~~ii~~~~~~~~~~~~~~~~~l~~i~~~~~eAA~~lGas~~q~f~~vilP~~~p~ii~~~~~~~~~~i~~~~i~~~ig 168 (217)
T 3dhw_A 89 LQAAIVPLTVGAAPFIARMVENALLEIPTGLIEASRAMGATPMQIVRKVLLPEALPGLVNAATITLITLVGYSAMGGAVG 168 (217)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHSCTTTTTHHHHHTCCTHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHCCSTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999998679999999999985898999998718989899969741997899999999999999999999999998
Q ss_pred CCCHHHHHHHH-HHHHCHHHHHHHHHHHHH----HHHHHHHHHHHHHHH
Q ss_conf 58804999999-974078989999999999----999999999987421
Q gi|254780341|r 235 SNGLGVPVLRA-LNTVDIGRGFESGLCIVI----LAIILDRLFSIPDPR 278 (281)
Q Consensus 235 ~~GLG~~i~~a-~~~~~~~~~~~~~l~Iv~----lai~lDri~~~~~~r 278 (281)
.+|+|+...+. .+..|.+...+..+.+.+ +....|++.++.+||
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~rR 217 (217)
T 3dhw_A 169 AGGLGQIGYQYGYIGYNATVMNTVLVLLVILVYLIQFAGDRIVRAVTRK 217 (217)
T ss_dssp CCHHHHHHHHHHHSSCCTTHHHHHHHHHHHHHHHHHHHCC---------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 8799999999999860089999999999999999999999999975699