HHSEARCH alignment of GI: 254780341 and SCOP domain: d2r6gg1

Alignment
>d2r6gg1 f.58.1.1 (G:7-296) Maltose transport system permease protein MalG {Escherichia coli [TaxId: 562]}
Probab=99.73  E-value=1.1e-17  Score=122.25  Aligned_cols=173  Identities=18%  Similarity=0.157  Sum_probs=133.4

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH-HHHHCCCHHHHHHHHCCCCCHHHHHHHHCC----------CCH
Q ss_conf             484499999999999999788766677642101211-232023503454420120210110000002----------101
Q gi|254780341|r   87 QGYWQETTETLSLVLVSTFISMFIGVPLGVLAAWYP-RFYSIIRLFLDSMQTIPTFVYLIPALVLFG----------LGM  155 (281)
Q Consensus        87 ~g~W~~~~~Tl~~~~~~~~ia~~igiplGi~~~~~~-~~~~~~~p~l~~~~~iP~~v~l~p~i~~fG----------~g~  155 (281)
                      .++|....+|+.....++.++..+|++.+..+.|++ +.++..+........+|..+...+....|+          .+.
T Consensus        73 ~~~~~~~~nSl~~a~~~~~~~~~ig~~~a~~l~r~~~~~~~~~~~~~~~~~~~P~~v~~i~~~~~~~~~g~~~~~~~~~~  152 (290)
T d2r6gg1          73 FPVLLWLWNSVKVAGISAIGIVALSTTCAYAFARMRFPGKATLLKGMLIFQMFPAVLSLVALYALFDRLGEYIPFIGLNT  152 (290)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTTSHHHHHHHHHTTSSCSSSHHHHHHHHHHHHHHHSTTSSTTS
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHEEEHHHCCCCCCCCCCCCCCCC
T ss_conf             17999987667766545556656777788888874413578999876413112312301002201133477566213574


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             78899999988789999958874129989999999607882010122368862679999999999999999999999705
Q gi|254780341|r  156 VPGIVATIVFSIPTSVRLTRLGIISTPPILKEAACAFGATPFQVFRKVELPFAIPQIVASLTQTIMLSLSMVVVTALVGS  235 (281)
Q Consensus       156 ~~~i~a~~i~~~~pi~~~t~~gl~~v~~~~~eaa~~~Gas~~q~l~~V~lP~a~P~i~~Gi~~~~~~~l~~vvia~~ig~  235 (281)
                      ...++.......|..++....+++++|+|+.|||+..|||+||+++||.+|..+|+++++.-.+.+.++.......+.++
T Consensus       153 ~~~ii~~~~~~~pf~~~~~~~~l~~i~~~l~EAA~~~GAs~~~~f~~I~lPl~~p~i~~~~il~fi~~~~~f~~~~~~~~  232 (290)
T d2r6gg1         153 HGGVIFAYLGGIALHVWTIKGYFETIDSSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLLR  232 (290)
T ss_dssp             HHHHHHHHTTTTHHHHHHHHHHHTTSCTHHHHHHHHTTCCHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCCHHHHHHCC
T ss_pred             HHHHHHHCCCCEEEEEECCCHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCC
T ss_conf             13442223550364200132054111166665686539977888899888863125666787876644110114411137


Q ss_pred             CC----HHHHHHHH--HHHHCHHHHHHHHH
Q ss_conf             88----04999999--97407898999999
Q gi|254780341|r  236 NG----LGVPVLRA--LNTVDIGRGFESGL  259 (281)
Q Consensus       236 ~G----LG~~i~~a--~~~~~~~~~~~~~l  259 (281)
                      ++    +...++..  .+..|.+...++.+
T Consensus       233 ~~~~~t~~~~i~~~~~~~~~~~~~~~A~~~  262 (290)
T d2r6gg1         233 DVNSYTLAVGMQQYLNPQNYLWGDFAAAAV  262 (290)
T ss_dssp             SGGGCCHHHHGGGGBCSSCBCHHHHHHHHH
T ss_pred             CCCCEEHHHHHHHHHHHCCCCHHHHHHHHH
T ss_conf             987166999999998440530999999999


SCOP domain information

class: Membrane and cell surface proteins and peptides
fold: MetI-like
superfamily: MetI-like
family: MetI-like
domain: Maltose transport system permease protein MalG
species: Escherichia coli [TaxId: 562]