RPSBLAST alignment for GI: 254780341 and conserved domain: COG1177
>gnl|CDD|31370 COG1177, PotC, ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism]. Length = 267
Score = 56.7 bits (137), Expect = 7e-09
Identities = 40/154 (25%), Positives = 68/154 (44%), Gaps = 6/154 (3%)
Query: 90 WQETTETLSLVLVSTFISMFIGVPLGVLAAWY-PRFYSIIRLFLDSMQTIPTFVYLIPAL 148
+L + L+S ++ +G + A Y R +++ + +P V I L
Sbjct: 64 LSALWNSLLIALLSALLATLLGTLAALALARYRFRGKNLLEGLILLPLVVPDIVTGIALL 123
Query: 149 VLF-----GLGMVPGIVATIVFSIPTSVRLTRLGIISTPPILKEAACAFGATPFQVFRKV 203
+LF G ++A IVF++P V + + L+EAA GA+P+Q FR+V
Sbjct: 124 LLFAALGLPGGFWTIVLAHIVFALPFVVVVVSARLQGFDRSLEEAARDLGASPWQTFRRV 183
Query: 204 ELPFAIPQIVASLTQTIMLSLSMVVVTALVGSNG 237
LP +P I++ LS V+T + G
Sbjct: 184 TLPLILPGILSGALLAFTLSFDEFVITFFLAGPG 217