HHsearch alignment for GI: 254780342 and conserved domain: COG2998

Probab=97.64  E-value=0.0036  Score=40.43  Aligned_cols=232  Identities=12%  Similarity=0.079  Sum_probs=116.8

Q ss_pred             HCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHC
Q ss_conf             03583458837994258869999999999999610698489985640578888514981399984046413566665530
Q gi|254780342|r   18 YARDADSCTPVRFADTGWTDIAATTAMTSVILEEILGYKTNIKLLAVPVTFRSLKNKGIDIFMGYWYPSLEKFIAPYLEE   97 (309)
Q Consensus        18 ~~~~~~~~~~I~ig~~~wte~~v~a~i~~~iLE~~lGy~Ve~~~~~~~~~~~al~~G~iD~~~e~w~p~~~~~~~~~~~~   97 (309)
T Consensus        22 ~~a~sa~~~~LrmATTTSt~dtGLLd~l~p~fE~~~g~~v~~vAvGTG~ALkmge~gdvDvv~vH-apk~E~~f---v~~   97 (280)
T COG2998          22 YSASSADAAELRMATTTSTEDTGLLDVLLPKFEKYTGYDVQVVAVGTGKALKMGERGDVDVVIVH-APKAEKEF---VKD   97 (280)
T ss_pred             HHCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEEEECCHHHHHHHCCCCCCEEEEE-CCHHHHHH---HHC
T ss_conf             86057542037885430245563188877766433696589998123587751126886789983-70778999---872


Q ss_pred             CCEEEECCCCCCCEEEEEEEHHHHH-CCCCC---HHHHHHHHHHHHHCCCC--CCCCCCCCHHHHHHHHHCCCCCCCEEE
Q ss_conf             4702301356685356786344641-23455---35655556654420135--785432005558766403545221001
Q gi|254780342|r   98 GSIKLVAENLQGAKYMLAVNDVGFA-LGIKS---YQDIAKYKKELGAKIYG--IEPGNEGNQRILDMINNNKFSLKGFRL  171 (309)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~v~~~~~~-~~i~~---~~dl~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~~~~l~~~~~~~  171 (309)
T Consensus        98 G~gv~r~---~vmYNdFiiVgp~~dpA~~k~~kn~~e~fe~Ia~~ka~FvSRGD~SGT~~~E~--~lWk~~g~~p~~~~w  172 (280)
T COG2998          98 GFGVDRR---PVMYNDFIIVGPADDPAGIKDAKNGKEAFEKIAEEKAKFVSRGDNSGTDSKEL--SLWKVTGIEPTVKGW  172 (280)
T ss_pred             CCCCCCC---CEEEEEEEEECCCCCCHHCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCHHHH--HHHHHCCCCCCCCCC
T ss_conf             7886676---10131179987766611112200089999999972890574278778427788--899870878898860


Q ss_pred             ECCCCCCHHHHHHHHHHCCCCEEEEEECCCHHHHCCC----CE-EECCCCCCCCCCHHHHHHHHCHH-HHH-HCHHHHHH
Q ss_conf             0366520189999999659936999412422320158----51-40078654677865835442777-787-48899999
Q gi|254780342|r  172 IEASELASFSQIRRDQRNNIPAVFLSWEPHPINSDLN----IH-YLPGGEEISGFGEASVYTVVRSD-YLD-KCPNISRL  244 (309)
Q Consensus       172 ~~~s~~~~~a~l~~A~~~~~~~v~~~wsp~~~~~~~d----l~-~Ledp~~~~~~p~~~~~~vv~~~-~~~-~~P~~~~~  244 (309)
T Consensus       173 Y~s~G~GMg~tL~~A~Ek~a----ytLtDrgTylaYr~r~~L~iv~~gd~~L~--N~Ysvi-~vNP~r~~~vny~~A~kf  245 (280)
T COG2998         173 YISAGQGMGDTLNMANEKKA----YTLTDRGTYLAYRNRPTLVIVLEGDPSLF--NPYSVI-AVNPKRVKGVNYTAATKF  245 (280)
T ss_pred             EEECCCCHHHHHHHHHHHCE----EEEECCCEEEEECCCCCEEEEECCCCCCC--CCEEEE-EECHHCCCCCCCHHHHHH
T ss_conf             36527445778777655121----68613630567627665289961781116--712589-876100788571189999


Q ss_pred             HHHCCCCHHHHHHHHHHHHHCCC
Q ss_conf             87408998999999999984599
Q gi|254780342|r  245 LKNIKFSVALENEMMKLILNNKQ  267 (309)
Q Consensus       245 L~~~~ls~~~~~~l~~~v~~~g~  267 (309)
T Consensus       246 i~w~--~s~~gq~~Ia~fkvng~  266 (280)
T COG2998         246 IEWL--MSEKGQNLIAEFKVNGQ  266 (280)
T ss_pred             HHHH--HHHHHHHHHHHCEECCE
T ss_conf             9999--64777888865056673