HHsearch alignment for GI: 254780342 and conserved domain: PRK04168
>PRK04168 hypothetical protein; Provisional.
Probab=94.87 E-value=0.33 Score=27.63 Aligned_cols=201 Identities=11% Similarity=0.102 Sum_probs=98.1
Q ss_pred HHHHHHHHHHHHHHHHHCC---CCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHC-C-CC
Q ss_conf 5799999999999863035---83458837994258869999999999999610698489985640578888514-9-81
Q gi|254780342|r 2 YKILAVCLFLTTFSISYAR---DADSCTPVRFADTGWTDIAATTAMTSVILEEILGYKTNIKLLAVPVTFRSLKN-K-GI 76 (309)
Q Consensus 2 kk~~~~~~~~~~~~~~~~~---~~~~~~~I~ig~~~wte~~v~a~i~~~iLE~~lGy~Ve~~~~~~~~~~~al~~-G-~i 76 (309)
T Consensus 6 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~Vf~AGSL~~-pf~ei~~~Fe~~~p~v~v~~e~~GS~~~ar~Ite~g~~a 84 (336)
T PRK04168 6 RKIVIVILLLLALVFLGCVNTSEAEPPGKLKIFHAGSLSV-PFEEYEKEFEAYYPNVDVQREAGGSVACVRKITELGKPA 84 (336)
T ss_pred EEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCHH-HHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCCCCC
T ss_conf 2203799999999970555777778861599997552589-999999999987899659998473899999999579998
Q ss_pred EEEEEEECCCCHHHHHHHHHCCCEEEECCCCCCCEEEEEEEHHH---HHCCCCCHHHHHHHHHHHHHCCCCCCCCC-CCC
Q ss_conf 39998404641356666553047023013566853567863446---41234553565555665442013578543-200
Q gi|254780342|r 77 DIFMGYWYPSLEKFIAPYLEEGSIKLVAENLQGAKYMLAVNDVG---FALGIKSYQDIAKYKKELGAKIYGIEPGN-EGN 152 (309)
Q Consensus 77 D~~~e~w~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~---~~~~i~~~~dl~~~~~~~~~~~~g~~~~~-~~~ 152 (309)
T Consensus 85 DVfaSAD~~~i~~ll~p~~ad-----w~v~FA~N~lViayt~~Sk~a~ei~~~nWyeiL~~~~---Vk~g~sdP~~DP~G 156 (336)
T PRK04168 85 DILASADYTLIPKMMIPEYAD-----WYVMFATNEIVLAYTDKSKYADEINSDNWYEILQRPG---VKWGFSDPNDDPCG 156 (336)
T ss_pred CEEEECCHHHHHHHHCCCCCC-----CEEEECCCEEEEEECCCCCCCCCCCCCCHHHHHCCCC---CEEEECCCCCCCCH
T ss_conf 889989857878874644334-----1012115538999768882110057331889857798---57983799889860
Q ss_pred H--HHHHHHHHCCCCCCC------------------------------EEEECCCCCCHHHHHHHHHHCCCCEEEEEECC
Q ss_conf 5--558766403545221------------------------------00103665201899999996599369994124
Q gi|254780342|r 153 Q--RILDMINNNKFSLKG------------------------------FRLIEASELASFSQIRRDQRNNIPAVFLSWEP 200 (309)
Q Consensus 153 ~--~~~~~~~~~~l~~~~------------------------------~~~~~~s~~~~~a~l~~A~~~~~~~v~~~wsp 200 (309)
T Consensus 157 yrt~~~~~LAe~~Y~~pgl~~~l~~~~~n~~~~~~~i~~p~~~~~n~~k~~~rp~e----~~Ll~~lesG~~Dy~f~Y~S 232 (336)
T PRK04168 157 YRSLMVLQLAELYYNDPTIYDKLVLKNTNFYVNGTYIRSPKEILVNRPKIFVRPKE----VELLGLLETGAMDYLFIYKS 232 (336)
T ss_pred HHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCEECCCH----HHHHHHHHCCCCCEEEEEEE
T ss_conf 89999999999860684178888640355334542235604311455431105526----77777875588646987624
Q ss_pred CHHHHCCCCEEECCCCC
Q ss_conf 22320158514007865
Q gi|254780342|r 201 HPINSDLNIHYLPGGEE 217 (309)
Q Consensus 201 ~~~~~~~dl~~Ledp~~ 217 (309)
T Consensus 233 ~A~q~--~L~yv~LP~e 247 (336)
T PRK04168 233 VAVQH--NLKYIELPDE 247 (336)
T ss_pred HHHHC--CCCCCCCCHH
T ss_conf 48676--9970038333