HHsearch alignment for GI: 254780342 and conserved domain: PRK09791

>PRK09791 putative DNA-binding transcriptional regulator; Provisional.
Probab=94.93  E-value=0.32  Score=27.73  Aligned_cols=198  Identities=13%  Similarity=0.158  Sum_probs=108.3

Q ss_pred             CCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCCEEE
Q ss_conf             45883799425886999999999999961069848998564057888851498139998404641356666553047023
Q gi|254780342|r   23 DSCTPVRFADTGWTDIAATTAMTSVILEEILGYKTNIKLLAVPVTFRSLKNKGIDIFMGYWYPSLEKFIAPYLEEGSIKL  102 (309)
Q Consensus        23 ~~~~~I~ig~~~wte~~v~a~i~~~iLE~~lGy~Ve~~~~~~~~~~~al~~G~iD~~~e~w~p~~~~~~~~~~~~~~~~~  102 (309)
T Consensus        92 ~~~G~l~Ig~~~~~~~~~lp~~l~~f~~~~P~v~i~i~~~~~~~~~~~l~~g~~D~~i~~~~~~~~~--------~~l~~  163 (302)
T PRK09791         92 QLAGQINIGMGASISRSLMPAVISRFHQQHPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYD--------HEFTF  163 (302)
T ss_pred             CCCCEEEEEECHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCCEEEECCCCCCCC--------CCEEE
T ss_conf             7663399986268898711999999999887977999989999999999879977899656788788--------76479


Q ss_pred             ECCCCCCCEEEEEEEHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEECCCCCCHHHH
Q ss_conf             01356685356786344641234553565555665442013578543200555876640354522100103665201899
Q gi|254780342|r  103 VAENLQGAKYMLAVNDVGFALGIKSYQDIAKYKKELGAKIYGIEPGNEGNQRILDMINNNKFSLKGFRLIEASELASFSQ  182 (309)
Q Consensus       103 ~~~~~~~~~~~~~v~~~~~~~~i~~~~dl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~s~~~~~a~  182 (309)
T Consensus       164 --~~l~~~~~~~v~~~~hpl~~~~~l~~l~~~------~~~~~~~~~~~~~~~~~~~~~~g~~p~-~~~~~~~----~~~  230 (302)
T PRK09791        164 --EKLLEKQFAIFCRPGHPAIGARSIKQLLDY------SWTMPTPHGSYYKQLSELLDDQAQTPQ-VGVVCET----FSA  230 (302)
T ss_pred             --EEEEEEEEEEEECCCCCCCCCCCHHHHHCC------CEEEECCCCCHHHHHHHHHHHCCCCCC-EEEEECC----HHH
T ss_conf             --997740159998389843579899998479------938757999799999999996799985-6999992----999


Q ss_pred             HHHHHHCCCCEEEEEECCCHH----HHCCCCEEECCCCCCCCCCHHHHHHHHCHHHHHHCHHHHHHHHHC
Q ss_conf             999996599369994124223----201585140078654677865835442777787488999998740
Q gi|254780342|r  183 IRRDQRNNIPAVFLSWEPHPI----NSDLNIHYLPGGEEISGFGEASVYTVVRSDYLDKCPNISRLLKNI  248 (309)
Q Consensus       183 l~~A~~~~~~~v~~~wsp~~~----~~~~dl~~Ledp~~~~~~p~~~~~~vv~~~~~~~~P~~~~~L~~~  248 (309)
T Consensus       231 ~~~lv~~g~gv~i---lp~~~~~~~~~~~~lv~lpl~~~~---~~~~~~lv~r~~~-~~spa~~~fi~~l  293 (302)
T PRK09791        231 CISLVAKSDFLSI---LPEEMGCDPLHGQGLVMLPVSEIL---PKAAYYLIQRRDS-RQTPLTASLITQF  293 (302)
T ss_pred             HHHHHHHCCEEEE---ECHHHHHHHHHCCCEEEEECCCCC---CCEEEEEEEECCC-CCCHHHHHHHHHH
T ss_conf             9999997896796---319999878748999999799988---6008999998909-8899999999999