HHsearch alignment for GI: 254780342 and conserved domain: PRK09986

>PRK09986 DNA-binding transcriptional activator XapR; Provisional.
Probab=94.24  E-value=0.46  Score=26.69  Aligned_cols=197  Identities=10%  Similarity=0.081  Sum_probs=107.5

Q ss_pred             CCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCCEE
Q ss_conf             34588379942588699999999999996106984899856405788885149813999840464135666655304702
Q gi|254780342|r   22 ADSCTPVRFADTGWTDIAATTAMTSVILEEILGYKTNIKLLAVPVTFRSLKNKGIDIFMGYWYPSLEKFIAPYLEEGSIK  101 (309)
Q Consensus        22 ~~~~~~I~ig~~~wte~~v~a~i~~~iLE~~lGy~Ve~~~~~~~~~~~al~~G~iD~~~e~w~p~~~~~~~~~~~~~~~~  101 (309)
T Consensus        77 ~~~~g~l~Ig~~~~~~~~~l~~~l~~f~~~~P~i~v~i~~~~~~~~~~~l~~~~~D~a~~~~-~~~~---~----~-~~~  147 (278)
T PRK09986         77 RGEAGRIELGVVGTALWGRMRPAMRHFLKENPNVEVLFREKSPSMQMALLERRELDAGIWRM-ALEP---N----P-GFT  147 (278)
T ss_pred             CCCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHCCCCCEEEECC-CCCC---C----C-CCE
T ss_conf             57777336874216888764289999998789839999978869999999779975899637-7778---8----7-742


Q ss_pred             EECCCCCCCEEEEEEEHHHH--HCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEECCCCCCH
Q ss_conf             30135668535678634464--1234553565555665442013578543200555876640354522100103665201
Q gi|254780342|r  102 LVAENLQGAKYMLAVNDVGF--ALGIKSYQDIAKYKKELGAKIYGIEPGNEGNQRILDMINNNKFSLKGFRLIEASELAS  179 (309)
Q Consensus       102 ~~~~~~~~~~~~~~v~~~~~--~~~i~~~~dl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~s~~~~  179 (309)
T Consensus       148 ~~--~l~~~~~~~~~~~~hpla~~~~i~~~~l~~------~~~i~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~---~  214 (278)
T PRK09986        148 SL--RLHESAFAVAVPEEHLLASKSSVPLKALRN------EYFVTLPSVHSDWGFLQRVCQQAGFSPQI--IREVN---E  214 (278)
T ss_pred             EE--EEEECCCEEEECCCCCCCCCCCCCHHHHCC------CCEEEECCCCCHHHHHHHHHHHCCCCCCE--EEEEC---C
T ss_conf             68--877416379965987333699999999859------99798679986699999999977998517--99999---8


Q ss_pred             HHHHHHHHHCCCCEEEEEECCCHHHHC--CCCEEECCCCCCCCCCHHHHHHHHCHHHHHHCHHHHHHHHHCC
Q ss_conf             899999996599369994124223201--5851400786546778658354427777874889999987408
Q gi|254780342|r  180 FSQIRRDQRNNIPAVFLSWEPHPINSD--LNIHYLPGGEEISGFGEASVYTVVRSDYLDKCPNISRLLKNIK  249 (309)
Q Consensus       180 ~a~l~~A~~~~~~~v~~~wsp~~~~~~--~dl~~Ledp~~~~~~p~~~~~~vv~~~~~~~~P~~~~~L~~~~  249 (309)
T Consensus       215 ~~~~~~~V~~G~Giai---lp~~~~~~~~~~v~~~Pl~~~----~~~~~~lv~~~~--~~~p~~~~fi~~l~  277 (278)
T PRK09986        215 PQTVLAMVSMGIGITL---VADSYAQMPWPGVVFRPLKER----IPADLYIVYHQQ--QATPALEKLLAALT  277 (278)
T ss_pred             HHHHHHHHHHCCEEEE---EHHHHHCCCCCCEEEEECCCC----CCEEEEEEECCC--CCCHHHHHHHHHHC
T ss_conf             9999999997998998---417774237899999988999----803899998499--99999999999865