HHsearch alignment for GI: 254780342 and conserved domain: PRK12682

>PRK12682 transcriptional regulator CysB-like protein; Reviewed.
Probab=92.01  E-value=1  Score=24.52  Aligned_cols=204  Identities=11%  Similarity=0.054  Sum_probs=114.1

Q ss_pred             CCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCCEEE
Q ss_conf             45883799425886999999999999961069848998564057888851498139998404641356666553047023
Q gi|254780342|r   23 DSCTPVRFADTGWTDIAATTAMTSVILEEILGYKTNIKLLAVPVTFRSLKNKGIDIFMGYWYPSLEKFIAPYLEEGSIKL  102 (309)
Q Consensus        23 ~~~~~I~ig~~~wte~~v~a~i~~~iLE~~lGy~Ve~~~~~~~~~~~al~~G~iD~~~e~w~p~~~~~~~~~~~~~~~~~  102 (309)
T Consensus        90 ~~~G~lrIg~~~~~~~~~lp~~l~~f~~~~P~v~l~l~~~~~~~~~~~l~~g~~Dl~i~~~-~~--------~~~~~l~~  160 (309)
T PRK12682         90 QDSGTLTIATTHTQARYVLPRVVAKFRKRYPKVNLSLHQGSPDEIAQMVISGEADIGIATE-SL--------DDDPDLVT  160 (309)
T ss_pred             CCCCCCCCCCCHHHHHHCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCCHHHHHC-CC--------CCCCCEEE
T ss_conf             6777412124313332038625399998789837999837829999999769976456507-77--------78988089


Q ss_pred             ECCCCCCCEEEEEEEHHHH--HCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEECCCCCCHH
Q ss_conf             0135668535678634464--12345535655556654420135785432005558766403545221001036652018
Q gi|254780342|r  103 VAENLQGAKYMLAVNDVGF--ALGIKSYQDIAKYKKELGAKIYGIEPGNEGNQRILDMINNNKFSLKGFRLIEASELASF  180 (309)
Q Consensus       103 ~~~~~~~~~~~~~v~~~~~--~~~i~~~~dl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~s~~~~~  180 (309)
T Consensus       161 ~-~l~~-~~~~~v~~~~h~la~~~~i~~~dL~~~------p~I~~~~~~~~r~~~~~~~~~~g~~p~-~~~~~~~----~  227 (309)
T PRK12682        161 L-PCYD-WTHAVIVPSDHPLAQKERITLEDLAEY------PLITYHPGFTGRSAIDKAFAAAGLQPD-IVLEAID----S  227 (309)
T ss_pred             E-EEEC-CCEEEEECCCCHHHCCCCCCHHHHCCC------CEEEECCCCCHHHHHHHHHHHCCCCCC-EEEEECC----H
T ss_conf             9-9331-523676169972114999999998289------979727998679999999997799962-6999998----9


Q ss_pred             HHHHHHHHCCCCEEEEEECCCHHHH---CCCCEEECCCCCCCCCCHHHHHHHHCHHHHHHCHHHHHHHHHC--CCCHHHH
Q ss_conf             9999999659936999412422320---1585140078654677865835442777787488999998740--8998999
Q gi|254780342|r  181 SQIRRDQRNNIPAVFLSWEPHPINS---DLNIHYLPGGEEISGFGEASVYTVVRSDYLDKCPNISRLLKNI--KFSVALE  255 (309)
Q Consensus       181 a~l~~A~~~~~~~v~~~wsp~~~~~---~~dl~~Ledp~~~~~~p~~~~~~vv~~~~~~~~P~~~~~L~~~--~ls~~~~  255 (309)
T Consensus       228 ~~~~~~v~~G~Gi~~---lp~~~~~~~~~~~Lv~v~~~~-~~--~~~~~~l~~rk~~-~l~~~~~~FId~l~e~l~~~~~  300 (309)
T PRK12682        228 DVIKTYVRLGLGVGI---IAEMAYRPDRDGDLVALPAGH-LF--GPNTAWVAVKRGA-YLRNYVYDFIELLAPHLSRELI  300 (309)
T ss_pred             HHHHHHHHHCCEEEH---HHHHHHHHHHCCCEEEEECCC-CC--CCCEEEEEEECCC-CCCHHHHHHHHHHHHHCCHHHH
T ss_conf             999999995994242---289983376479989997988-77--7617999996966-1189999999999987298999