HHsearch results for GI: 254780342 and protein with PDBid: 1i6a_A
>1i6a_A OXYR, hydrogen peroxide-inducible genes activator; OXYR regulatory domain, oxidized form, transcription; 2.30A {Escherichia coli} SCOP: c.94.1.1 PDB: 1i69_A
Probab=92.91 E-value=0.42 Score=25.57 Aligned_cols=193 Identities=12% Similarity=0.058 Sum_probs=101.3
Q ss_pred CCEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCCEEEECC
Q ss_conf 83799425886999999999999961069848998564057888851498139998404641356666553047023013
Q gi|254780342|r 26 TPVRFADTGWTDIAATTAMTSVILEEILGYKTNIKLLAVPVTFRSLKNKGIDIFMGYWYPSLEKFIAPYLEEGSIKLVAE 105 (309)
Q Consensus 26 ~~I~ig~~~wte~~v~a~i~~~iLE~~lGy~Ve~~~~~~~~~~~al~~G~iD~~~e~w~p~~~~~~~~~~~~~~~~~~~~ 105 (309)
++|+||.........+..++++..++.=+.++++...++..+.+.+.+|++|+....-.+........
T Consensus 5 G~lrIg~~~~~~~~~lp~~l~~f~~~~P~v~i~i~~~~~~~l~~~l~~~~~d~~~~~~~~~~~~~~~~------------ 72 (219)
T 1i6a_A 5 GPLHIGLIPTVGPYLLPHIIPMLHQTFPKLEMYLHEAQTHQLLAQLDSGKLDAVILALVKESEAFIEV------------ 72 (219)
T ss_dssp EEEEEEECTTTHHHHHHHHHHHHHHHCTTEEEEEEECCHHHHHHHHHHTSCSEEEEECCGGGTTSEEE------------
T ss_pred EEEEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCCCHHHHCCCCCCCCCCCCC------------
T ss_conf 89999837779999999999999998889689999888488888875364010102355323453234------------
Q ss_pred CCCCCEEEEEEEHHHH--HCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEECCCCCCHHHHH
Q ss_conf 5668535678634464--12345535655556654420135785432005558766403545221001036652018999
Q gi|254780342|r 106 NLQGAKYMLAVNDVGF--ALGIKSYQDIAKYKKELGAKIYGIEPGNEGNQRILDMINNNKFSLKGFRLIEASELASFSQI 183 (309)
Q Consensus 106 ~~~~~~~~~~v~~~~~--~~~i~~~~dl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~s~~~~~a~l 183 (309)
........++++..-+ ...-.++.++... ..+..+.+..............+. .....-.......+
T Consensus 73 ~l~~~~~~~v~~~~hpla~~~~i~~~~l~~~------~~i~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 141 (219)
T 1i6a_A 73 PLFDEPMLLAIYEDHPWANREAVPMADLAGE------KLLMLEDGHCLRDQAMGFCFEAGA-----DEDTHFRATSLETL 141 (219)
T ss_dssp EEEEEEEEEEEETTSGGGGCSCEEGGGGTTS------EEECCTTTTCSSCTTSSCSSCTTS-----EEECTTTTSCHHHH
T ss_pred CCCCCCEEEEEECCCHHHCCCCCCHHHHHCC------CEEEECCCCCHHHHHHHHHHHCCC-----CCCEEEEECCHHHH
T ss_conf 3445536999925971116999898998047------689845875315677789997389-----98704774899999
Q ss_pred HHHHHCCCCEEEEEECCCHH----HHCCCCEEECCCCCCCCCCHHHHHHHHCHHHHHHCHHHHHHHHHC
Q ss_conf 99996599369994124223----201585140078654677865835442777787488999998740
Q gi|254780342|r 184 RRDQRNNIPAVFLSWEPHPI----NSDLNIHYLPGGEEISGFGEASVYTVVRSDYLDKCPNISRLLKNI 248 (309)
Q Consensus 184 ~~A~~~~~~~v~~~wsp~~~----~~~~dl~~Ledp~~~~~~p~~~~~~vv~~~~~~~~P~~~~~L~~~ 248 (309)
.+.+++|..+.+ -|... ....+++.+..+... +...+..+.+++.. ..|.+..|++-+
T Consensus 142 ~~lv~~g~gi~~---lp~~~~~~~~~~~~l~~l~~~~~~---~~~~~~lv~~~~~~-~~~~~~~~~~~l 203 (219)
T 1i6a_A 142 RNMVAAGSGITL---LPALAVPPERKRDGVVYLPAIKPE---PRRTIGLVYRPGSP-LRSRYEQLAEAI 203 (219)
T ss_dssp HHHHHTTSCBEE---EEGGGSCSSSEETTEEEECEESSC---CEEEEEEEECTTCT-THHHHHHHHHHH
T ss_pred HHHHHHCCEEEE---ECHHHHHHHHHCCCEEEEECCCCC---CEEEEEEEEECCCC-CCHHHHHHHHHH
T ss_conf 999980998999---038999755107988999888998---53599999979196-789999999999