HHsearch results for GI: 254780342 and protein with PDBid: 1wdn_A
>1wdn_A GLNBP, glutamine binding protein; closed form, complex, peptide, complex (binding protein/peptide); 1.94A {Escherichia coli} SCOP: c.94.1.1 PDB: 1ggg_A
Probab=93.80 E-value=0.16 Score=28.20 Aligned_cols=186 Identities=12% Similarity=0.131 Sum_probs=94.7
Q ss_pred CCCEEEECC-CCC------HH---HHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCEEEEEEECCCCHHHHHHH
Q ss_conf 883799425-886------99---99999999999610698489985640578888514981399984046413566665
Q gi|254780342|r 25 CTPVRFADT-GWT------DI---AATTAMTSVILEEILGYKTNIKLLAVPVTFRSLKNKGIDIFMGYWYPSLEKFIAPY 94 (309)
Q Consensus 25 ~~~I~ig~~-~wt------e~---~v~a~i~~~iLE~~lGy~Ve~~~~~~~~~~~al~~G~iD~~~e~w~p~~~~~~~~~ 94 (309)
.++|+||.. +|+ ++ -+..+++.++.++ +|++++++..+-..++++|.+|++|+.+..+..+ ....
T Consensus 2 ~k~l~v~~~~~~pP~~~~~~g~~~G~~~dl~~~ia~~-~g~~~~~~~~~~~~~~~~l~~g~~D~~~~~~~~t-~~r~--- 76 (226)
T 1wdn_A 2 DKKLVVATDTAFVPFEFKQGDLYVGFDVDLWAAIAKE-LKLDYELKPMDFSGIIPALQTKNVDLALAGITIT-DERK--- 76 (226)
T ss_dssp --CEEEEEESSBTTTBEEETTEEESHHHHHHHHHHHH-HTCCEEEEEECGGGHHHHHHTTSSSEEEEEEECC-HHHH---
T ss_pred CCEEEEEECCCCCCEEEEECCEEEEHHHHHHHHHHHH-HCCCEEEEECCHHHHHHHHHCCCCCEEEEECCCC-HHHC---
T ss_conf 9509999899978848811995888799999999999-6996699978999999998769986574421235-4132---
Q ss_pred HHCCCEEEECCCCCCCEEEEEEEHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEECC
Q ss_conf 53047023013566853567863446412345535655556654420135785432005558766403545221001036
Q gi|254780342|r 95 LEEGSIKLVAENLQGAKYMLAVNDVGFALGIKSYQDIAKYKKELGAKIYGIEPGNEGNQRILDMINNNKFSLKGFRLIEA 174 (309)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~i~~~~dl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 174 (309)
..+. ....+......+++++. .+.+.+++||. ++.+|...+.... ..++... .........
T Consensus 77 ---~~~~-fs~p~~~~~~~~~~~~~--~~~~~~~~dl~-------g~~v~~~~g~~~~----~~l~~~~-~~~~~~~~~- 137 (226)
T 1wdn_A 77 ---KAID-FSDGYYKSGLLVMVKAN--NNDVKSVKDLD-------GKVVAVKSGTGSV----DYAKANI-KTKDLRQFP- 137 (226)
T ss_dssp ---TTSE-ECSCCEEEEEEEEEETT--CCSCSSSTTTT-------TCEEEEETTSHHH----HHHHHHC-CCSEEEEES-
T ss_pred ---CEEE-ECCCEEEEEEEEEEECC--CCCCCCHHHHC-------CCEEEEECCCCCC----CHHHHHC-CCCCEEEEC-
T ss_conf ---5488-24556997779999999--99999979958-------9999998786642----0123430-355236507-
Q ss_pred CCCCHHHHHHHHHHCCCCEEEEEECCCHHH--HC---CCCEEECCCCCCCCCCHHHHHHHHCHHHHHHCHHHHHHHHH
Q ss_conf 652018999999965993699941242232--01---58514007865467786583544277778748899999874
Q gi|254780342|r 175 SELASFSQIRRDQRNNIPAVFLSWEPHPIN--SD---LNIHYLPGGEEISGFGEASVYTVVRSDYLDKCPNISRLLKN 247 (309)
Q Consensus 175 s~~~~~a~l~~A~~~~~~~v~~~wsp~~~~--~~---~dl~~Ledp~~~~~~p~~~~~~vv~~~~~~~~P~~~~~L~~ 247 (309)
+ ..+...++.+|+.+++....+.+.. .. .++..+..+. .......++++ ++|++.+.|++
T Consensus 138 ~----~~~~~~~l~~g~vD~~i~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~k----~~~~l~~~~n~ 202 (226)
T 1wdn_A 138 N----IDNAYMELGTNRADAVLHDTPNILYFIKTAGNGQFKAVGDSL-----EAQQYGIAFPK----GSDELRDKVNG 202 (226)
T ss_dssp S----HHHHHHHHHTTSCSEEEEEHHHHHHHHHTTTTTTEEEEEEEE-----EEEEEEEEECT----TCHHHHHHHHH
T ss_pred C----HHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCCCEEEECCCC-----CCCCEEEEEEC----CCHHHHHHHHH
T ss_conf 7----899998874584689991618888887641567405515567-----77618999979----99999999999