HHsearch results for GI: 254780342 and protein with PDBid: 2b4l_A
>2b4l_A Glycine betaine-binding protein; substrate-binding protein, closed liganded, ABC-transporter, compatible solutes, transport protein; 2.00A {Bacillus subtilis} PDB: 2b4m_A* 3chg_D
Probab=100.00 E-value=2.2e-38 Score=268.15 Aligned_cols=165 Identities=21% Similarity=0.396 Sum_probs=157.1
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCEEEEEECCCHHHHCCCC
Q ss_conf 65555665442013578543200555876640354522100103665201899999996599369994124223201585
Q gi|254780342|r 130 DIAKYKKELGAKIYGIEPGNEGNQRILDMINNNKFSLKGFRLIEASELASFSQIRRDQRNNIPAVFLSWEPHPINSDLNI 209 (309)
Q Consensus 130 dl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~s~~~~~a~l~~A~~~~~~~v~~~wsp~~~~~~~dl 209 (309)
++++.++.|+++|+||+|||+++......++.|+|+ +++++++|+++|++++.+|+++++|+|+|+|+|||++.+|++
T Consensus 2 ~~~~~~~~~~~~I~Gi~pG~g~~~~~~~~i~~ygL~--~~~l~~gS~aam~a~l~~A~~~~epiv~~~W~Phw~~~~~dl 79 (268)
T 2b4l_A 2 ENASAAEQVNKTIIGIDPGSGIMSLTDKAMKDYDLN--DWTLISASSAAMTATLKKSYDRKKPIIITGWTPHWMFSRYKL 79 (268)
T ss_dssp TTCCHHHHTTTEEECCCTTSHHHHHHHHHHHHTTCT--TCEEECCCHHHHHHHHHHHHHTTCCCCEEEEESCTHHHHSCE
T ss_pred CHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCC--CEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHCCCE
T ss_conf 345679974997998579846899999999966999--728714889999999999997699989981223155330745
Q ss_pred EEECCCCCCCCCCHHHHHHHHCHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 14007865467786583544277778748899999874089989999999999845999899999999985999998754
Q gi|254780342|r 210 HYLPGGEEISGFGEASVYTVVRSDYLDKCPNISRLLKNIKFSVALENEMMKLILNNKQDRQFVGRTMLRTHPDLLKNWLI 289 (309)
Q Consensus 210 ~~Ledp~~~~~~p~~~~~~vv~~~~~~~~P~~~~~L~~~~ls~~~~~~l~~~v~~~g~~~~~vA~~wL~~n~~~~~~Wl~ 289 (309)
++|+||++.++ ++..+.+++|++|+++||+++++|++|+||++++++|++.|+ +|++|+++|++||++|+++|++||+
T Consensus 80 ~~LedP~~~~g-~~~~v~~~~~~~f~~~~P~a~~~l~~~~~t~~~~~~l~~~i~-~g~~~~~aA~~Wl~~n~~~v~~Wl~ 157 (268)
T 2b4l_A 80 KYLDDPKQSYG-SAEEIHTITRKGFSKEQPNAAKLLSQFKWTQDEMGEIMIKVE-EGEKPAKVAAEYVNKHKDQIAEWTK 157 (268)
T ss_dssp EECBCTTCTTC-SSEEEEEEEETTHHHHSHHHHHHHHTCCCCHHHHHHHHHHHH-TTCCHHHHHHHHHHHCHHHHHHHTT
T ss_pred EECCCCCCCCC-CCHHHHHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHHH-CCCCHHHHHHHHHHHCHHHHHHHHH
T ss_conf 76146577778-721301163011466695999999974889999999999998-5999999999999979299998851
Q ss_pred CCCCCCCHH
Q ss_conf 754567713
Q gi|254780342|r 290 GVTTFDGQD 298 (309)
Q Consensus 290 ~~~~~~~~~ 298 (309)
|++|.+++.
T Consensus 158 g~~~~~~~~ 166 (268)
T 2b4l_A 158 GVQKVKGDK 166 (268)
T ss_dssp TCCCCSSCE
T ss_pred CCCCCCCCC
T ss_conf 654677775