HHsearch results for GI: 254780342 and protein with PDBid: 2fyi_A
>2fyi_A HTH-type transcriptional regulator CBL; Lys-R family, cofactor-binding domain, cysteine biosynthesis; 2.80A {Escherichia coli K12} SCOP: c.94.1.1
Probab=96.83 E-value=0.025 Score=33.57 Aligned_cols=207 Identities=14% Similarity=-0.001 Sum_probs=119.8
Q ss_pred CCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCCEEE
Q ss_conf 45883799425886999999999999961069848998564057888851498139998404641356666553047023
Q gi|254780342|r 23 DSCTPVRFADTGWTDIAATTAMTSVILEEILGYKTNIKLLAVPVTFRSLKNKGIDIFMGYWYPSLEKFIAPYLEEGSIKL 102 (309)
Q Consensus 23 ~~~~~I~ig~~~wte~~v~a~i~~~iLE~~lGy~Ve~~~~~~~~~~~al~~G~iD~~~e~w~p~~~~~~~~~~~~~~~~~ 102 (309)
...++|+||...-....++..++++.-++.=+.++++..+++..+.+.|.+|++|+..-...... ...+..
T Consensus 11 ~~~G~lrIg~~~~~a~~~Lp~~l~~f~~~~P~i~l~i~~~~~~~l~~~L~~g~~D~ai~~~~~~~---------~~~~~~ 81 (228)
T 2fyi_A 11 DTSGVLTIATTHTQARYSLPEVIKAFRELFPEVRLELIQGTPQEIATLLQNGEADIGIASERLSN---------DPQLVA 81 (228)
T ss_dssp TCCEEEEEEECHHHHHHTHHHHHHHHHHHCTTEEEEEEECCHHHHHHHHHHTSCSEEEESSSSTT---------CTTEEE
T ss_pred CCCCEEEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCCCCEEEEECCCCC---------CCCCEE
T ss_conf 99717999975889999999999999998899489999676599999986688332333112356---------865336
Q ss_pred ECCCCCCCEEEEEEEHHHH--HCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEECCCCCCHH
Q ss_conf 0135668535678634464--12345535655556654420135785432005558766403545221001036652018
Q gi|254780342|r 103 VAENLQGAKYMLAVNDVGF--ALGIKSYQDIAKYKKELGAKIYGIEPGNEGNQRILDMINNNKFSLKGFRLIEASELASF 180 (309)
Q Consensus 103 ~~~~~~~~~~~~~v~~~~~--~~~i~~~~dl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~s~~~~~ 180 (309)
. ........+++++.-+ ...-.++.+|.+ ..++..++++..+..........+..... .+...+ .
T Consensus 82 ~--~l~~~~~~~v~~~~~~~~~~~~i~~~dL~~------~p~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~----~ 148 (228)
T 2fyi_A 82 F--PWFRWHHSLLVPHDHPLTQISPLTLESIAK------WPLITYRQGITGRSRIDDAFARKGLLADI-VLSAQD----S 148 (228)
T ss_dssp E--EEEEECEEEEEETTCGGGTSSSCCHHHHTT------SCEEEECTTSTTHHHHHHHHHHTTCCCCE-EEEESS----H
T ss_pred E--EEEECCCCEECCCCCCCCCCCCCCHHHHHC------CCCCCCCCCCCHHHHHHHHHHHCCCCCCE-EEEECC----H
T ss_conf 7--732034301135642000344444788725------97212689981788899876503877753-478478----9
Q ss_pred HHHHHHHHCCCCEEEEEECCCHHH---HCCCCEEECCCCCCCCCCHHHHHHHHCHHHHHHCHHHHHHHHHC--CCCHHHH
Q ss_conf 999999965993699941242232---01585140078654677865835442777787488999998740--8998999
Q gi|254780342|r 181 SQIRRDQRNNIPAVFLSWEPHPIN---SDLNIHYLPGGEEISGFGEASVYTVVRSDYLDKCPNISRLLKNI--KFSVALE 255 (309)
Q Consensus 181 a~l~~A~~~~~~~v~~~wsp~~~~---~~~dl~~Ledp~~~~~~p~~~~~~vv~~~~~~~~P~~~~~L~~~--~ls~~~~ 255 (309)
..+...+..|..+.+ -|+... ...+++.+..+... +...+..+.++ -....|.+..|++-+ .++.+++
T Consensus 149 ~~~~~~v~~g~gi~~---lp~~~~~~~~~~~lv~l~~~~~~---~~~~~~l~~~~-~~~~~~~~~~Fi~~~~~~l~~~~~ 221 (228)
T 2fyi_A 149 DVIKTYVALGLGIGL---VAEQSSGEQEEENLIRLDTRHLF---DANTVWLGLKR-GQLQRNYVWRFLELCNAGLSVEDI 221 (228)
T ss_dssp HHHHHHHHHTSCEEE---EEGGGGSTTCCTTEEEECCTTTS---CCEEEEEEEET-TCCBCHHHHHHHHHHCSSSCHHHH
T ss_pred HHHHHHHHCCCEEEE---CCHHHHHHHHCCCEEEEECCCCC---CCEEEEEEEEC-CCCCCHHHHHHHHHHHHCCCHHHH
T ss_conf 999999865999998---63999856545998999687777---64089999989-686799999999999864898999
Q ss_pred HHH
Q ss_conf 999
Q gi|254780342|r 256 NEM 258 (309)
Q Consensus 256 ~~l 258 (309)
.+.
T Consensus 222 ~~~ 224 (228)
T 2fyi_A 222 KRQ 224 (228)
T ss_dssp HHH
T ss_pred HHH
T ss_conf 999