HHsearch results for GI: 254780342 and protein with PDBid: 2hpg_A
>2hpg_A ABC transporter, periplasmic substrate-binding protein; periplasmic binding protein, thermophilic proteins, trap- transport; HET: MSE; 1.90A {Thermotoga maritima}
Probab=90.99 E-value=0.77 Score=23.85 Aligned_cols=238 Identities=9% Similarity=0.032 Sum_probs=115.8
Q ss_pred CCCCCCCEEEECCC--CCHHHHHHHHHHHHHHHCCCCEEEEE--E----CCHHHHHHHHHCCCCEEEEEEE------CCC
Q ss_conf 83458837994258--86999999999999961069848998--5----6405788885149813999840------464
Q gi|254780342|r 21 DADSCTPVRFADTG--WTDIAATTAMTSVILEEILGYKTNIK--L----LAVPVTFRSLKNKGIDIFMGYW------YPS 86 (309)
Q Consensus 21 ~~~~~~~I~ig~~~--wte~~v~a~i~~~iLE~~lGy~Ve~~--~----~~~~~~~~al~~G~iD~~~e~w------~p~ 86 (309)
..++.-++++++.- .+.......-.+..+++..|.++++. + ++...+++++..|.+|+..-.- .|.
T Consensus 4 ~~a~~~tlk~~~~~p~~~~~~~~~~~fa~~v~e~s~G~v~i~v~~~g~Lg~~~e~~~~v~~G~vd~~~~~~~~~~~~~p~ 83 (327)
T 2hpg_A 4 VFGAKYTLRFGHVLAPGEPYHQAFLKWAKAVEEKTNGDVRIEVFPSSQLGVEEDIIEQIRMGAPVGWNTDSARLGMYVKD 83 (327)
T ss_dssp CCCCSEEEEEECCCSTTSHHHHHHHHHHHHHHHHTTTSEEEEEECCCCSCCCCCHHHHHHHTCSEEEEEEHHHHTTTSGG
T ss_pred HHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHCCCCEEEEECCCHHHHHHHH
T ss_conf 10187799997888998989999999999999876992999996687668879999999769970673243012125666
Q ss_pred CH---------------------------------HHHHHHHHCCCEEEECCCCCCCEEEEEEEHHHHHCCCCCHHHHHH
Q ss_conf 13---------------------------------566665530470230135668535678634464123455356555
Q gi|254780342|r 87 LE---------------------------------KFIAPYLEEGSIKLVAENLQGAKYMLAVNDVGFALGIKSYQDIAK 133 (309)
Q Consensus 87 ~~---------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~i~~~~dl~~ 133 (309)
.. ..+.+..++.+++.++....+....+.. ...+.+.+||+
T Consensus 84 ~~~~~lPfl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~L~~~~~~~~~~~~~-----~~pi~s~~Dlk- 157 (327)
T 2hpg_A 84 IGVMNLAYFIDFMGAKTPEEAIEVLKKIKQSPTMQKWLKELEQRFGIKVLSFYWVQGYRHFVT-----NKPIRKPEDLN- 157 (327)
T ss_dssp GGGGGSTTHHHHTTCCSHHHHHHHHHHHHTSHHHHHHHHHHHHHHCEEEEEEEEEEEEEEEEE-----SSCCSSGGGGT-
T ss_pred HCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEC-----CCCCCCHHHHC-
T ss_conf 320234200466555888999999999864989999999998862984231212576056765-----88889979977-
Q ss_pred HHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCEEEEEECCCHHHHC--CC-CE
Q ss_conf 5665442013578543200555876640354522100103665201899999996599369994124223201--58-51
Q gi|254780342|r 134 YKKELGAKIYGIEPGNEGNQRILDMINNNKFSLKGFRLIEASELASFSQIRRDQRNNIPAVFLSWEPHPINSD--LN-IH 210 (309)
Q Consensus 134 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~s~~~~~a~l~~A~~~~~~~v~~~wsp~~~~~~--~d-l~ 210 (309)
+..+-+.+ .......++..|. ..++.+ +.+++.|+++|..+-... ++.+.... ++ .+
T Consensus 158 ------G~kiR~~g----~~~~~~~~~~~Ga-----~pv~~~----~~ev~~aLqtG~iDg~~~-~~~~~~~~~~~e~~~ 217 (327)
T 2hpg_A 158 ------GLRIRTPG----APAWQESIRSLGA-----IPVAVN----FGEIYTAVQTRAVDGAEL-TYANVYNGGLYEVLK 217 (327)
T ss_dssp ------TCEEECCS----SHHHHHHHHHHTS-----EEECCC----GGGHHHHHHTTSCSEEEE-CHHHHHHTTGGGTCC
T ss_pred ------CCEEEECC----CHHHHHHHHHCCC-----CCCCCC----CCCHHHHHHCCCEEEEEE-CCCCCCCCCCEEEEC
T ss_conf ------98598448----7478999997388-----310467----641667987586458972-420001355000204
Q ss_pred EECCCCCCCCCCHHHHHHHHCHHHHHHCH-HHHHHHHHC------CCCHHHH----HHHHHHHHHCCC-----CHHHHHH
Q ss_conf 40078654677865835442777787488-999998740------8998999----999999984599-----9899999
Q gi|254780342|r 211 YLPGGEEISGFGEASVYTVVRSDYLDKCP-NISRLLKNI------KFSVALE----NEMMKLILNNKQ-----DRQFVGR 274 (309)
Q Consensus 211 ~Ledp~~~~~~p~~~~~~vv~~~~~~~~P-~~~~~L~~~------~ls~~~~----~~l~~~v~~~g~-----~~~~vA~ 274 (309)
+.-++...+ ... ..+++++.-+.-| +..++|... .+..+.. .+....+...|. ++++. +
T Consensus 218 ~~t~~~~~~--~~~--~~~~n~~~~~~L~~e~q~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~s~~e~-~ 292 (327)
T 2hpg_A 218 YMSETGHFL--LIN--FEIVSADWFNSLPKEYQKIIEEEMDKAGIEVSLKIMKELEEEYKQKCIEKGMAVIPASEIDK-E 292 (327)
T ss_dssp EEEEEEEEE--EEE--EEEEEHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTCEEECGGGSCH-H
T ss_pred EEECCCCCC--CHH--HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHH-H
T ss_conf 586289754--205--88714999974999999999999999999999999999999999999978799997999999-9
Q ss_pred HHHHHHHHHHHHHHC
Q ss_conf 999985999998754
Q gi|254780342|r 275 TMLRTHPDLLKNWLI 289 (309)
Q Consensus 275 ~wL~~n~~~~~~Wl~ 289 (309)
+|.+.-+..|++|..
T Consensus 293 ~~~~~~~~~~~~~~~ 307 (327)
T 2hpg_A 293 AFMEKAKQAYKNLGL 307 (327)
T ss_dssp HHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHC
T ss_conf 999999999999955