HHsearch results for GI: 254780342 and protein with PDBid: 2hzl_A
>2hzl_A Trap-T family sorbitol/mannitol transporter, periplasmic binding protein, SMOM; trap transporter, periplasmic subunit, ligand binding; 1.40A {Rhodobacter sphaeroides 2} PDB: 2hzk_A
Probab=97.92 E-value=0.00075 Score=43.41 Aligned_cols=254 Identities=8% Similarity=-0.013 Sum_probs=120.8
Q ss_pred CCCCCCEEEECC---CCCHHHHHHHHHHHHHHHCCCCEEEEE--E----CCHHHHHHHHHCCCCEEEEEE---ECCCC--
Q ss_conf 345883799425---886999999999999961069848998--5----640578888514981399984---04641--
Q gi|254780342|r 22 ADSCTPVRFADT---GWTDIAATTAMTSVILEEILGYKTNIK--L----LAVPVTFRSLKNKGIDIFMGY---WYPSL-- 87 (309)
Q Consensus 22 ~~~~~~I~ig~~---~wte~~v~a~i~~~iLE~~lGy~Ve~~--~----~~~~~~~~al~~G~iD~~~e~---w~p~~-- 87 (309)
+....++++++. +-+.........+..+|+..|.++++. + ++...+++++..|.+|+..-. +....
T Consensus 28 aa~~~tlr~a~~~p~~~~~~~~~~~~fa~~V~e~T~G~v~i~~~~~g~Lg~~~e~~e~v~~G~vd~~~~~~~~~~~~~p~ 107 (365)
T 2hzl_A 28 SAPKVTWRLASSFPKSLDTIFGGAEVLSKMLSEATDGNFQIQVFSAGELVPGLQAADAVTEGTVECCHTVGYYYWGKDPT 107 (365)
T ss_dssp ----CEEEEEESSCTTCTTTTHHHHHHHHHHHHHTTTSSEEEEECTTTSSCGGGHHHHHHTTSSSEEEECGGGGTTTCTH
T ss_pred CCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHCCCCCCEEEECCCCCCCCCE
T ss_conf 26656999980699988637799999999999975991999996186436406589999769975312101124677740
Q ss_pred -------------------------HHHHHHHHHCCCEEEECCCCCCCEEEEEEEHHHHHCCCCCHHHHHHHHHHHHHCC
Q ss_conf -------------------------3566665530470230135668535678634464123455356555566544201
Q gi|254780342|r 88 -------------------------EKFIAPYLEEGSIKLVAENLQGAKYMLAVNDVGFALGIKSYQDIAKYKKELGAKI 142 (309)
Q Consensus 88 -------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~i~~~~dl~~~~~~~~~~~ 142 (309)
.........+.....+.....+....++. ...+.+.+|++. ..
T Consensus 108 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~-----~~pi~~~~DlkG-------~k 175 (365)
T 2hzl_A 108 FALAAAVPFSLSARGINAWHYHGGGIDLYNEFLSQHNIVAFPGGNTGVQMGGWF-----RREINTVADMQG-------LK 175 (365)
T ss_dssp HHHTTCCTTCCCHHHHHHHHHHSSHHHHHHHHHGGGTEEEEEEEECCSBCCCEE-----SSCCCSTGGGTT-------CE
T ss_pred EEEEECCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCEEEEEECCCCEEEEEC-----CCCCCCHHHHCC-------CE
T ss_conf 456411567689899999986131177888878760717999735885045665-----988667688449-------87
Q ss_pred CCCCCCCCCCHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCEEEEEECCCHHHHC---CCCE-EECCCCCC
Q ss_conf 3578543200555876640354522100103665201899999996599369994124223201---5851-40078654
Q gi|254780342|r 143 YGIEPGNEGNQRILDMINNNKFSLKGFRLIEASELASFSQIRRDQRNNIPAVFLSWEPHPINSD---LNIH-YLPGGEEI 218 (309)
Q Consensus 143 ~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~s~~~~~a~l~~A~~~~~~~v~~~wsp~~~~~~---~dl~-~Ledp~~~ 218 (309)
+=..+ .....++.. |. ..++.+ +.+++.|+++|-++-... ++.+.... +... +...|...
T Consensus 176 iR~~~------~~~~~~~al--Ga---~pv~~~----~~Evy~ALqtGvVDg~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 239 (365)
T 2hzl_A 176 MRVGG------FAGKVMERL--GV---VPQQIA----GGDIYPALEKGTIDATEW-VGPYDDEKLGFFKVAPYYYYPGWW 239 (365)
T ss_dssp EECCT------THHHHHHTT--TC---EEECCC----TTSHHHHHHHTSCSEECC-SCHHHHHHHTGGGTCCEEEECBTT
T ss_pred ECCCC------HHHHHHHHC--CC---EEEECC----CCHHHHHHHHCCEEEEEC-CCHHHHHHHCCHHEEEEEECCCCC
T ss_conf 30484------689999974--97---244137----502778987185215762-665578870551214688507866
Q ss_pred CCCCHHHHHHHHCHHHHHHCH-HHHHHHHHC---------CCCHHHHHHHHHHHHHCCC----CHHHHHHHHHHHHHHHH
Q ss_conf 677865835442777787488-999998740---------8998999999999984599----98999999999859999
Q gi|254780342|r 219 SGFGEASVYTVVRSDYLDKCP-NISRLLKNI---------KFSVALENEMMKLILNNKQ----DRQFVGRTMLRTHPDLL 284 (309)
Q Consensus 219 ~~~p~~~~~~vv~~~~~~~~P-~~~~~L~~~---------~ls~~~~~~l~~~v~~~g~----~~~~vA~~wL~~n~~~~ 284 (309)
++.+ ....++|+++-+.-| +..++++.. ....+...+....+...|. -+++.-+.|.+.-...|
T Consensus 240 ~~~~--~~~~~~N~~~w~~Lp~e~q~~i~~a~~~a~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~e~~~~~~~aa~~v~ 317 (365)
T 2hzl_A 240 EGGP--TVHFMFNKSAYEGLTPTYQSLLRTACHAADANMLQLYDWKNPTAIKSLVAQGTQLRPFSPEILQACFEAANEVY 317 (365)
T ss_dssp CSSC--EEEEEEEHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEECCHHHHHHHHHHHHHHH
T ss_pred CCCC--EEEEEECHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHH
T ss_conf 5652--06999849998519999999999999999999999999970999999997859999899999999999999999
Q ss_pred HHHHCCCCCCCCHHHHHHHHHHH
Q ss_conf 98754754567713799999874
Q gi|254780342|r 285 KNWLIGVTTFDGQDPSRQLERFM 307 (309)
Q Consensus 285 ~~Wl~~~~~~~~~~~~~~~~~~~ 307 (309)
++|-+ +..+++..-+..|.++
T Consensus 318 ~e~~~--~~~~~~~i~d~~k~~~ 338 (365)
T 2hzl_A 318 AEMEA--SNPAFKKIWDSIKAFR 338 (365)
T ss_dssp HHHHH--HCHHHHHHHHHHHHHH
T ss_pred HHHHH--CCHHHHHHHHHHHHHH
T ss_conf 99980--4986999999999999