HHsearch results for GI: 254780342 and protein with PDBid: 2rin_A
>2rin_A Putative glycine betaine-binding ABC transporter protein; type II binding protein, aromatic BOX, acetylcholine, protein binding; HET: ACH; 1.80A {Rhizobium meliloti} PDB: 2rej_A 2rf1_A 2reg_A* 3hcq_A
Probab=100.00 E-value=0 Score=462.12 Aligned_cols=288 Identities=49% Similarity=0.895 Sum_probs=275.8
Q ss_pred CCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCC
Q ss_conf 58345883799425886999999999999961069848998564057888851498139998404641356666553047
Q gi|254780342|r 20 RDADSCTPVRFADTGWTDIAATTAMTSVILEEILGYKTNIKLLAVPVTFRSLKNKGIDIFMGYWYPSLEKFIAPYLEEGS 99 (309)
Q Consensus 20 ~~~~~~~~I~ig~~~wte~~v~a~i~~~iLE~~lGy~Ve~~~~~~~~~~~al~~G~iD~~~e~w~p~~~~~~~~~~~~~~ 99 (309)
+.|++++||+||+++|+|+.++++|++++||+ +||+|+++.++++++|+||++|+||+|+|||+|.....+.+...++.
T Consensus 1 a~p~~~~~V~ig~~~w~~~~~~a~i~~~vLe~-~Gy~Ve~~~~~~~~~~~al~~GdID~~~e~W~p~~~~~~~~~~~~~~ 79 (298)
T 2rin_A 1 AEPESCGTVRFSDVGWTDITATTATATTILEA-LGYETDVKVLSVPVTYTSLKNKDIDVFLGNWMPTMEADIAPYREDKS 79 (298)
T ss_dssp ---CCTTEEEEECCSCHHHHHHHHHHHHHHHH-HTCEEEEECCCHHHHHHHHHHTSCCEEEEEEETTTHHHHHHHHTTTS
T ss_pred CCCCCCCCEEEEECCCCHHHHHHHHHHHHHHH-CCCCEEEEECCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCC
T ss_conf 98144897699746976699999999999998-69924898687099999998799808840466400166799886145
Q ss_pred EEEECCCCCCCEEEEEEEHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEECCCCCCH
Q ss_conf 02301356685356786344641234553565555665442013578543200555876640354522100103665201
Q gi|254780342|r 100 IKLVAENLQGAKYMLAVNDVGFALGIKSYQDIAKYKKELGAKIYGIEPGNEGNQRILDMINNNKFSLKGFRLIEASELAS 179 (309)
Q Consensus 100 ~~~~~~~~~~~~~~~~v~~~~~~~~i~~~~dl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~s~~~~ 179 (309)
++.++.++.+...+++|+.+.++++|++|+||.++.+.|+++++||++++.+........+.|+|++.++++..+++++|
T Consensus 80 ~~~l~~~~~~~~~~~~v~~~~a~~~i~sisDL~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~ 159 (298)
T 2rin_A 80 VETVRENLAGAKYTLATNAKGAELGIKDFKDIAAHKDELDGKIYGIEPGNDGNRLIIDMVEKGTFDLKGFEVVESSEQGM 159 (298)
T ss_dssp EEEEEEEEEEEEEEEEEEHHHHHHTCCBGGGSGGGHHHHTSEEECCSTTCHHHHHHHHHHHHTGGGCTTCEEECCCHHHH
T ss_pred CEECCCCCCCCEEEEEECCHHHHCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHCCCCCCCEECCCCHHHH
T ss_conf 31114445686158875304444276747777653552377467225642224331456665026887654204646779
Q ss_pred HHHHHHHHHCCCCEEEEEECCCHHHHCCCCEEECCCCCCCC--CCHHHHHHHHCHHHHHHCHHHHHHHHHCCCCHHHHHH
Q ss_conf 89999999659936999412422320158514007865467--7865835442777787488999998740899899999
Q gi|254780342|r 180 FSQIRRDQRNNIPAVFLSWEPHPINSDLNIHYLPGGEEISG--FGEASVYTVVRSDYLDKCPNISRLLKNIKFSVALENE 257 (309)
Q Consensus 180 ~a~l~~A~~~~~~~v~~~wsp~~~~~~~dl~~Ledp~~~~~--~p~~~~~~vv~~~~~~~~P~~~~~L~~~~ls~~~~~~ 257 (309)
++++++|+++|+|+++++|+|||++.+|+|++|+||++.|+ +|.+++.+++|++|+++||+++++|++++|++++|++
T Consensus 160 ~a~l~~A~~~~~~~v~~~w~p~~~~~~~dL~~LeDp~~~~~~~~~a~~v~~v~~~~~~~~~P~~~~~L~~~~l~~~~m~~ 239 (298)
T 2rin_A 160 LAQVARAEKSGDPIVFLGWEPHPMNANFKLTYLSGGDDVFGPNYGGATVHTNVRAGYTTECPNVDKLLQNLSFSLQMENE 239 (298)
T ss_dssp HHHHHHHHHTTCCCEEEEEESSTHHHHSCEEECBSCTTTTCHHHHEEEEEEEEETTHHHHSHHHHHHHHHCCCCHHHHHH
T ss_pred HHHHHHHHHCCCCEEEEECCCCHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCHHHHHH
T ss_conf 99999998468857998268732220376478058854468887620000287566777697999999967799999999
Q ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHC
Q ss_conf 999998459998999999999859999987547545677137999998744
Q gi|254780342|r 258 MMKLILNNKQDRQFVGRTMLRTHPDLLKNWLIGVTTFDGQDPSRQLERFMN 308 (309)
Q Consensus 258 l~~~v~~~g~~~~~vA~~wL~~n~~~~~~Wl~~~~~~~~~~~~~~~~~~~~ 308 (309)
||++|+++|++|++||++||++|+++|++||+||+|.||+|+.++||.+++
T Consensus 240 ln~~v~~~g~~~~~vA~~wL~~n~~~v~~Wl~g~~~~~~~d~~~~~~~~~~ 290 (298)
T 2rin_A 240 IMGKILNDGEDPEKAAAAWLKDNPQSIEPWLSGVATKDGGDGLAAVKAALG 290 (298)
T ss_dssp HHHHHHTTCCCHHHHHHHHHHHSGGGHHHHTTTCBCTTSSBHHHHHHHHHT
T ss_pred HHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCHHHHHHHHCC
T ss_conf 999998649999999999999797999999668777777508999999749