HHsearch results for GI: 254780342 and protein with PDBid: 2rin_A

>2rin_A Putative glycine betaine-binding ABC transporter protein; type II binding protein, aromatic BOX, acetylcholine, protein binding; HET: ACH; 1.80A {Rhizobium meliloti} PDB: 2rej_A 2rf1_A 2reg_A* 3hcq_A
Probab=100.00  E-value=0  Score=462.12  Aligned_cols=288  Identities=49%  Similarity=0.895  Sum_probs=275.8

Q ss_pred             CCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCC
Q ss_conf             58345883799425886999999999999961069848998564057888851498139998404641356666553047
Q gi|254780342|r   20 RDADSCTPVRFADTGWTDIAATTAMTSVILEEILGYKTNIKLLAVPVTFRSLKNKGIDIFMGYWYPSLEKFIAPYLEEGS   99 (309)
Q Consensus        20 ~~~~~~~~I~ig~~~wte~~v~a~i~~~iLE~~lGy~Ve~~~~~~~~~~~al~~G~iD~~~e~w~p~~~~~~~~~~~~~~   99 (309)
                      +.|++++||+||+++|+|+.++++|++++||+ +||+|+++.++++++|+||++|+||+|+|||+|.....+.+...++.
T Consensus         1 a~p~~~~~V~ig~~~w~~~~~~a~i~~~vLe~-~Gy~Ve~~~~~~~~~~~al~~GdID~~~e~W~p~~~~~~~~~~~~~~   79 (298)
T 2rin_A            1 AEPESCGTVRFSDVGWTDITATTATATTILEA-LGYETDVKVLSVPVTYTSLKNKDIDVFLGNWMPTMEADIAPYREDKS   79 (298)
T ss_dssp             ---CCTTEEEEECCSCHHHHHHHHHHHHHHHH-HTCEEEEECCCHHHHHHHHHHTSCCEEEEEEETTTHHHHHHHHTTTS
T ss_pred             CCCCCCCCEEEEECCCCHHHHHHHHHHHHHHH-CCCCEEEEECCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCC
T ss_conf             98144897699746976699999999999998-69924898687099999998799808840466400166799886145


Q ss_pred             EEEECCCCCCCEEEEEEEHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEECCCCCCH
Q ss_conf             02301356685356786344641234553565555665442013578543200555876640354522100103665201
Q gi|254780342|r  100 IKLVAENLQGAKYMLAVNDVGFALGIKSYQDIAKYKKELGAKIYGIEPGNEGNQRILDMINNNKFSLKGFRLIEASELAS  179 (309)
Q Consensus       100 ~~~~~~~~~~~~~~~~v~~~~~~~~i~~~~dl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~s~~~~  179 (309)
                      ++.++.++.+...+++|+.+.++++|++|+||.++.+.|+++++||++++.+........+.|+|++.++++..+++++|
T Consensus        80 ~~~l~~~~~~~~~~~~v~~~~a~~~i~sisDL~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~a~  159 (298)
T 2rin_A           80 VETVRENLAGAKYTLATNAKGAELGIKDFKDIAAHKDELDGKIYGIEPGNDGNRLIIDMVEKGTFDLKGFEVVESSEQGM  159 (298)
T ss_dssp             EEEEEEEEEEEEEEEEEEHHHHHHTCCBGGGSGGGHHHHTSEEECCSTTCHHHHHHHHHHHHTGGGCTTCEEECCCHHHH
T ss_pred             CEECCCCCCCCEEEEEECCHHHHCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHCCCCCCCEECCCCHHHH
T ss_conf             31114445686158875304444276747777653552377467225642224331456665026887654204646779


Q ss_pred             HHHHHHHHHCCCCEEEEEECCCHHHHCCCCEEECCCCCCCC--CCHHHHHHHHCHHHHHHCHHHHHHHHHCCCCHHHHHH
Q ss_conf             89999999659936999412422320158514007865467--7865835442777787488999998740899899999
Q gi|254780342|r  180 FSQIRRDQRNNIPAVFLSWEPHPINSDLNIHYLPGGEEISG--FGEASVYTVVRSDYLDKCPNISRLLKNIKFSVALENE  257 (309)
Q Consensus       180 ~a~l~~A~~~~~~~v~~~wsp~~~~~~~dl~~Ledp~~~~~--~p~~~~~~vv~~~~~~~~P~~~~~L~~~~ls~~~~~~  257 (309)
                      ++++++|+++|+|+++++|+|||++.+|+|++|+||++.|+  +|.+++.+++|++|+++||+++++|++++|++++|++
T Consensus       160 ~a~l~~A~~~~~~~v~~~w~p~~~~~~~dL~~LeDp~~~~~~~~~a~~v~~v~~~~~~~~~P~~~~~L~~~~l~~~~m~~  239 (298)
T 2rin_A          160 LAQVARAEKSGDPIVFLGWEPHPMNANFKLTYLSGGDDVFGPNYGGATVHTNVRAGYTTECPNVDKLLQNLSFSLQMENE  239 (298)
T ss_dssp             HHHHHHHHHTTCCCEEEEEESSTHHHHSCEEECBSCTTTTCHHHHEEEEEEEEETTHHHHSHHHHHHHHHCCCCHHHHHH
T ss_pred             HHHHHHHHHCCCCEEEEECCCCHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCHHHHHH
T ss_conf             99999998468857998268732220376478058854468887620000287566777697999999967799999999


Q ss_pred             HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHC
Q ss_conf             999998459998999999999859999987547545677137999998744
Q gi|254780342|r  258 MMKLILNNKQDRQFVGRTMLRTHPDLLKNWLIGVTTFDGQDPSRQLERFMN  308 (309)
Q Consensus       258 l~~~v~~~g~~~~~vA~~wL~~n~~~~~~Wl~~~~~~~~~~~~~~~~~~~~  308 (309)
                      ||++|+++|++|++||++||++|+++|++||+||+|.||+|+.++||.+++
T Consensus       240 ln~~v~~~g~~~~~vA~~wL~~n~~~v~~Wl~g~~~~~~~d~~~~~~~~~~  290 (298)
T 2rin_A          240 IMGKILNDGEDPEKAAAAWLKDNPQSIEPWLSGVATKDGGDGLAAVKAALG  290 (298)
T ss_dssp             HHHHHHTTCCCHHHHHHHHHHHSGGGHHHHTTTCBCTTSSBHHHHHHHHHT
T ss_pred             HHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCHHHHHHHHCC
T ss_conf             999998649999999999999797999999668777777508999999749