HHsearch results for GI: 254780342 and protein with PDBid: 2zzv_A
>2zzv_A ABC transporter, solute-binding protein; periplasmic substrate binding protein, calcium, lactate, trap transporter, transport protein; 1.40A {Thermus thermophilus} PDB: 2zzw_A 2zzx_A
Probab=97.16 E-value=0.014 Score=35.16 Aligned_cols=244 Identities=9% Similarity=-0.040 Sum_probs=119.2
Q ss_pred CCCCCCCCCEEEEC--CCCCHHHHHHHHHHHHHHHCCCCEEEEE--E----CCHHHHHHHHHCCCCEEEEEEEC------
Q ss_conf 35834588379942--5886999999999999961069848998--5----64057888851498139998404------
Q gi|254780342|r 19 ARDADSCTPVRFAD--TGWTDIAATTAMTSVILEEILGYKTNIK--L----LAVPVTFRSLKNKGIDIFMGYWY------ 84 (309)
Q Consensus 19 ~~~~~~~~~I~ig~--~~wte~~v~a~i~~~iLE~~lGy~Ve~~--~----~~~~~~~~al~~G~iD~~~e~w~------ 84 (309)
+..+.+..++++++ ..-+......+..+..+++..|..+++. + ++...+++++..|.+|+..-...
T Consensus 27 ~~a~a~~~tlk~~~~~p~~~~~~~~~~~f~~~V~e~t~G~i~i~~~~~g~Lg~~~e~~~~v~~G~~d~~~~~~~~~~~~~ 106 (361)
T 2zzv_A 27 AVAQARRYRWRIQTAWDAGTVGYSLFQKFTERVKELTDGQLEVQPFPAGAVVGTFDMFDAVKTGVLDGMNPFTLYWAGRM 106 (361)
T ss_dssp -----CCEEEEEEESSCTTSHHHHHHHHHHHHHHHHTTTSEEEEEECTTSSSCGGGHHHHHHHTSSSEEECBGGGGTTTC
T ss_pred HHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCC
T ss_conf 87446746999983789987657999999999999769908999955866576799999997598752542022246766
Q ss_pred ------------CCC-------------HHHHHHHHHCCCEEEECCCCCCCEEEEEEEHHHHHCCCCCHHHHHHHHHHHH
Q ss_conf ------------641-------------3566665530470230135668535678634464123455356555566544
Q gi|254780342|r 85 ------------PSL-------------EKFIAPYLEEGSIKLVAENLQGAKYMLAVNDVGFALGIKSYQDIAKYKKELG 139 (309)
Q Consensus 85 ------------p~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~i~~~~dl~~~~~~~~ 139 (309)
+.. ...+.....+..+..++....+... ++.. ..+.+++||+
T Consensus 107 p~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~-~~s~-----kpi~s~~Dlk------- 173 (361)
T 2zzv_A 107 PVTAFLSSYALGLDRPDQWETWFYSLGGLDIARRAFAEQGLFYVGPVQHDLNI-IHSK-----KPIRRFEDFK------- 173 (361)
T ss_dssp GGGGGSSCCTTSCCSHHHHHHHHHTSSHHHHHHHHHHHTTEEEEEEECCCCCC-EEES-----SCCCSGGGGT-------
T ss_pred CHHHHHCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHCCEEEEEEECCCCCEE-EECC-----CCCCCCCCCC-------
T ss_conf 07777235312477699999987131367899887524629998404787503-4248-----8765730137-------
Q ss_pred HCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCEEEEEECCCH--HHHCCCC-EEECC-C
Q ss_conf 201357854320055587664035452210010366520189999999659936999412422--3201585-14007-8
Q gi|254780342|r 140 AKIYGIEPGNEGNQRILDMINNNKFSLKGFRLIEASELASFSQIRRDQRNNIPAVFLSWEPHP--INSDLNI-HYLPG-G 215 (309)
Q Consensus 140 ~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~s~~~~~a~l~~A~~~~~~~v~~~wsp~~--~~~~~dl-~~Led-p 215 (309)
+..+-+.+. .....++.. |. ..++.+ +.+++.|+++|..+-...-.+.. .+.-++. +++-+ +
T Consensus 174 G~kiR~~~~-----~~~~~~~~l--Ga---~pv~i~----~~ev~~ALq~G~vDg~~~~~~~~~~~~~~~ev~ky~~~~~ 239 (361)
T 2zzv_A 174 GVKLRVPGG-----MIAEVFAAA--GA---STVLLP----GGEVYPALERGVIDAADFVGPAVNYNLGFHQVAKYIIMGP 239 (361)
T ss_dssp TCEEECCSH-----HHHHHHHHT--TC---EEECCC----GGGHHHHHHTTSCSEEECSCHHHHHHTTHHHHCSEEEECC
T ss_pred CCEEEECCC-----HHHHHHHHC--CC---CCEECC----CHHHHHHHHHCCCCEEECCCHHHHHCCCCEEEEEEEEECC
T ss_conf 957993583-----689999976--99---514458----6046789874563402146265552146314678999567
Q ss_pred CCC--CCCCHHHHHHHHCHHHHHHCH-HHHHHHHHC---------CCCHHHHHHHHHHHHHCCC----CHHHHHHHHHHH
Q ss_conf 654--677865835442777787488-999998740---------8998999999999984599----989999999998
Q gi|254780342|r 216 EEI--SGFGEASVYTVVRSDYLDKCP-NISRLLKNI---------KFSVALENEMMKLILNNKQ----DRQFVGRTMLRT 279 (309)
Q Consensus 216 ~~~--~~~p~~~~~~vv~~~~~~~~P-~~~~~L~~~---------~ls~~~~~~l~~~v~~~g~----~~~~vA~~wL~~ 279 (309)
... ++.+......++++++-+.-| +..++|... ....+...+....+...|. -+.+.-++|.+.
T Consensus 240 ~~~~~~~~~~~~~~~~~n~~~w~~L~~e~q~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~G~~i~~~s~~e~~~~~~~ 319 (361)
T 2zzv_A 240 PETPAIHQPVDLMDFTINLNRWRSLPKPLQERFIAAVHEYSWIHYAGIQKANLEAWPKYRQAGVEVIRLSNEDVRKFRRL 319 (361)
T ss_dssp TTSSCSSCSSCCEEEEEEHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEECCHHHHHHHHHH
T ss_pred CCCCCCCCCCCCHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHH
T ss_conf 77764332220035320289997189999999999999999999999999889999999978799998999999999999
Q ss_pred HHHHHHHHHC
Q ss_conf 5999998754
Q gi|254780342|r 280 HPDLLKNWLI 289 (309)
Q Consensus 280 n~~~~~~Wl~ 289 (309)
-...|++|.+
T Consensus 320 ~~~v~~~~a~ 329 (361)
T 2zzv_A 320 AIPIWFKWAK 329 (361)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHH
T ss_conf 9999999985