HHsearch results for GI: 254780342 and protein with PDBid: 3del_B
>3del_B Arginine binding protein; alpha and beta protein (A/B), periplasmic protein, protein binding, transport protein; 1.92A {Chlamydia trachomatis}
Probab=96.31 E-value=0.0065 Score=37.31 Aligned_cols=159 Identities=8% Similarity=-0.020 Sum_probs=84.1
Q ss_pred HHHCCCCCCCCCEEEECC-CC---C---HH----HHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCEEEEEEEC
Q ss_conf 630358345883799425-88---6---99----9999999999961069848998564057888851498139998404
Q gi|254780342|r 16 ISYARDADSCTPVRFADT-GW---T---DI----AATTAMTSVILEEILGYKTNIKLLAVPVTFRSLKNKGIDIFMGYWY 84 (309)
Q Consensus 16 ~~~~~~~~~~~~I~ig~~-~w---t---e~----~v~a~i~~~iLE~~lGy~Ve~~~~~~~~~~~al~~G~iD~~~e~w~ 84 (309)
|+..+...++++++||.. +| + +. -+...|++.+.+ .+|++++++..+...+..++.+|++|+......
T Consensus 1 c~~~~~~~~~~~l~Vg~~~~~pP~~~~~~~G~~~G~~vDi~~~ia~-~lg~~v~~~~~~~~~~~~~l~~g~~d~~~~~~~ 79 (242)
T 3del_B 1 CLKEGGDSNSEKFIVGTNATYPPFEFVDKRGEVVGFDIDLAREISN-KLGKTLDVREFSFDALILNLKQHRIDAVITGMS 79 (242)
T ss_dssp ----------CEEEEEECSCBTTTBEECTTSCEESHHHHHHHHHHH-HHTCEEEEEECCGGGHHHHHHTTSSSEECSSBB
T ss_pred CCCCCCCCCCCEEEEEECCCCCCCEEECCCCCEEEEHHHHHHHHHH-HHCCCEEEEECCHHHHHHHHHCCCCCCCCCCCC
T ss_conf 9776777889969999899889915899999888729999999999-969976999789899999997598661003576
Q ss_pred CCCHHHHHHHHHCCCEEEECCCCCCCEEEEEEEHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCC
Q ss_conf 64135666655304702301356685356786344641234553565555665442013578543200555876640354
Q gi|254780342|r 85 PSLEKFIAPYLEEGSIKLVAENLQGAKYMLAVNDVGFALGIKSYQDIAKYKKELGAKIYGIEPGNEGNQRILDMINNNKF 164 (309)
Q Consensus 85 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~i~~~~dl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l 164 (309)
. ..... ......+.+......+++... ...+.++.++. ++.+|...++.. ...++.+
T Consensus 80 ~-~~~r~-------~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~-------~~~Vgv~~gs~~----~~~l~~~-- 136 (242)
T 3del_B 80 I-TPSRL-------KEILMIPYYGEEIKHLVLVFK--GENKHPLPLTQ-------YRSVAVQTGTYQ----EAYLQSL-- 136 (242)
T ss_dssp C-CHHHH-------TTEEEEEEEEEEESEEEEEEE--SCCSCCCCGGG-------SSCEEEETTSHH----HHHHHHS--
T ss_pred C-CHHHH-------HHCCCCCCCCCCCCEEEEEEC--CCCCCHHHHHC-------CCCEEEECCCHH----HHHHHHC--
T ss_conf 9-98898-------313678643235532688631--54332134420-------220024257435----8999856--
Q ss_pred CCCCEEEECCCCCCHHHHHHHHHHCCCCEEEEEECCCHH
Q ss_conf 522100103665201899999996599369994124223
Q gi|254780342|r 165 SLKGFRLIEASELASFSQIRRDQRNNIPAVFLSWEPHPI 203 (309)
Q Consensus 165 ~~~~~~~~~~s~~~~~a~l~~A~~~~~~~v~~~wsp~~~ 203 (309)
. +.+++.-+ -..++..++.+|+.+++....+...
T Consensus 137 ~--~~~i~~~~---~~~~~~~~L~~griD~~i~~~~~~~ 170 (242)
T 3del_B 137 S--EVHIRSFD---STLEVLMEVMHGKSPVAVLEPSIAQ 170 (242)
T ss_dssp T--TCCEEEES---SHHHHHHHHHTTSSSEEEECHHHHH
T ss_pred C--CCEEEEEE---CCCHHHHHHHCCCEEEEEECHHHHH
T ss_conf 5--87079861---4531256886397439996699999