HHsearch results for GI: 254780342 and protein with PDBid: 3fzv_A

>3fzv_A Probable transcriptional regulator; LYSR, structural genomics, PSI-2, protein structure initiative; 2.71A {Pseudomonas aeruginosa PA01}
Probab=92.09  E-value=0.59  Score=24.58  Aligned_cols=199  Identities=7%  Similarity=-0.019  Sum_probs=107.6

Q ss_pred             CCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCCEEE
Q ss_conf             45883799425886999999999999961069848998564057888851498139998404641356666553047023
Q gi|254780342|r   23 DSCTPVRFADTGWTDIAATTAMTSVILEEILGYKTNIKLLAVPVTFRSLKNKGIDIFMGYWYPSLEKFIAPYLEEGSIKL  102 (309)
Q Consensus        23 ~~~~~I~ig~~~wte~~v~a~i~~~iLE~~lGy~Ve~~~~~~~~~~~al~~G~iD~~~e~w~p~~~~~~~~~~~~~~~~~  102 (309)
                      ....+++||..+.....++..+++.+.++.=+.++++...++..+.+.|.+|++|+..-+-.+...          ... 
T Consensus        92 ~~~~~~~i~~~~~~~~~~l~~~l~~~~~~~P~i~l~~~~~~~~~~~~~L~~~~~Di~i~~~~~~~~----------~~~-  160 (306)
T 3fzv_A           92 VIAGQIDIGCFETVAPLYLPGLIAGFRQAYPGVEIRIRDGEQQELVQGLTSGRFDLAFLYEHDLDS----------TIE-  160 (306)
T ss_dssp             CCCEEEEEEEEGGGHHHHHHHHHHHHHHHCTTEEEEEEEECHHHHHHHHHHTSCSEEEECSSSCCT----------TEE-
T ss_pred             CCCCEEEEEEEHHHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHCCCCCEEEEECCCCCC----------CCE-
T ss_conf             777526888504789999899999998538974999997877999999985997368883578998----------725-


Q ss_pred             ECCCCCCCEEEEEEEHHHH--HCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEECCCCCCHH
Q ss_conf             0135668535678634464--12345535655556654420135785432005558766403545221001036652018
Q gi|254780342|r  103 VAENLQGAKYMLAVNDVGF--ALGIKSYQDIAKYKKELGAKIYGIEPGNEGNQRILDMINNNKFSLKGFRLIEASELASF  180 (309)
Q Consensus       103 ~~~~~~~~~~~~~v~~~~~--~~~i~~~~dl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~s~~~~~  180 (309)
                      .-..+......+++++.-+  .....++++|.++.      .+..+ ....+.......+..++... ..+...+    .
T Consensus       161 ~~~l~~~~~~~v~~~~~~~l~~~~~~~~~dl~~~~------~i~~~-~~~~~~~~~~~~~~~g~~~~-~~~~~~~----~  228 (306)
T 3fzv_A          161 TEPLMPPQRPHALLPEGHRFAGQAQVSLRDLCLEP------MILLD-VQPSRTYFVSLFEELGLTPN-IAFSSPS----I  228 (306)
T ss_dssp             EEESSCCBCCEEEEETTCTTTTSSEECHHHHTTSC------EEEEC-CTTHHHHHHHHHHHTTCCCC-EEEEESC----H
T ss_pred             EEEECCCCEEEEEECCCHHHHCCCCCCHHHHHCCC------EEEEC-CCCCCCHHHHHHHHCCCCCC-CCCCCCC----H
T ss_conf             89921462689996264265337889999981799------89845-98765104556765387754-2546788----8


Q ss_pred             HHHHHHHHCCCCEEEEEECC--CHHHHCCCCEEECCCCCCCCCCHHHHHHHHCHHHHHHCHHHHHHHHHC
Q ss_conf             99999996599369994124--223201585140078654677865835442777787488999998740
Q gi|254780342|r  181 SQIRRDQRNNIPAVFLSWEP--HPINSDLNIHYLPGGEEISGFGEASVYTVVRSDYLDKCPNISRLLKNI  248 (309)
Q Consensus       181 a~l~~A~~~~~~~v~~~wsp--~~~~~~~dl~~Ledp~~~~~~p~~~~~~vv~~~~~~~~P~~~~~L~~~  248 (309)
                      ..+..++..|..+.+..-.+  +.......++.++.+...   +...+..+.+++ ....|.+..|++-+
T Consensus       229 ~~~~~~v~~g~gi~~lp~~~~~~~~~~~~~l~~~~~~~~~---~~~~~~li~~~~-~~~~~~~~~fi~~l  294 (306)
T 3fzv_A          229 EMVRGMVGQGFGFSLLVTRPHSECTYDGKKVVMVDLAEPV---STSGLAAAWLKR-AQLTKPARLFVDYC  294 (306)
T ss_dssp             HHHHHHHHTTSCBEEECCCCSCSBCTTSCBEEEEEESSCC---CBCCCEEEEETT-SCCCHHHHHHHHHH
T ss_pred             HHHHHHHHCCCEEEEEEHHHHHHHHHCCCCEEEEECCCCC---CCCEEEEEEECC-CCCCHHHHHHHHHH
T ss_conf             9999999809949994258788987569977998677887---642799999898-98999999999999