HHsearch results for GI: 254780342 and protein with PDBid: 3gxa_A
>3gxa_A Outer membrane lipoprotein GNA1946; periplasmic, L-methionine bingding, protein binding; 2.25A {Neisseria meningitidis}
Probab=98.60 E-value=1.4e-06 Score=61.11 Aligned_cols=215 Identities=13% Similarity=0.104 Sum_probs=115.3
Q ss_pred HHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEEC-CHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHH
Q ss_conf 3035834588379942588699999999999996106984899856-405788885149813999840464135666655
Q gi|254780342|r 17 SYARDADSCTPVRFADTGWTDIAATTAMTSVILEEILGYKTNIKLL-AVPVTFRSLKNKGIDIFMGYWYPSLEKFIAPYL 95 (309)
Q Consensus 17 ~~~~~~~~~~~I~ig~~~wte~~v~a~i~~~iLE~~lGy~Ve~~~~-~~~~~~~al~~G~iD~~~e~w~p~~~~~~~~~~ 95 (309)
..++.+...++|+||....+...+..+.++.++|+. ||+||++.. +.....+||.+|+||+-.-.-.|....+...
T Consensus 14 ~~~~~~~~~~~i~ig~~~~~~~~~~~~~v~~~~k~~-Gi~Ve~v~f~d~~~~n~AL~~G~iD~n~~q~~p~l~~~~~~-- 90 (275)
T 3gxa_A 14 AAADNGAAKKEIVFGTTVGDFGDMVKEQIQPELEKK-GYTVKLVEFTDYVRPNLALAEGELDINVFQHKPYLDDFKKE-- 90 (275)
T ss_dssp ---------CEEEEEEETTHHHHHHHHTHHHHHHTT-TCEEEEEEESSSSHHHHHHHHTSCSEEEEECHHHHHHHHHH--
T ss_pred CCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHC-CCEEEEEEECCCHHHHHHHHCCCCCEECCCCHHHHHHHHHH--
T ss_conf 445677888528999606987999999989999965-98799999578335789986699554314457889999997--
Q ss_pred HCCCEEEECCCCCCCEEEEEEEHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCC-----------
Q ss_conf 304702301356685356786344641234553565555665442013578543200555876640354-----------
Q gi|254780342|r 96 EEGSIKLVAENLQGAKYMLAVNDVGFALGIKSYQDIAKYKKELGAKIYGIEPGNEGNQRILDMINNNKF----------- 164 (309)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~i~~~~dl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l----------- 164 (309)
....++.++..+... .+++.. .++++.++++ +..++.+............++..|+
T Consensus 91 ~g~~l~~v~~~~~~~-~glys~------k~ksl~dl~~------G~kIaip~d~sn~~raL~~L~~~Gli~l~~~~~~~~ 157 (275)
T 3gxa_A 91 HNLDITEVFQVPTAP-LGLYPG------KLKSLEEVKD------GSTVSAPNDPSNFARVLVMLDELGWIKLKDGINPLT 157 (275)
T ss_dssp HTCCEEEEEECCBCC-CEEEES------SCCCGGGCCT------TCEEEEECSHHHHHHHHHHHHHTTSSEECTTCCGGG
T ss_pred CCCCEEEEEEEECCC-EEEEEC------CCCCHHHCCC------CCEEEEECCCCHHHHHHHHHHHCCCEECCCCCCCCC
T ss_conf 799679985631155-066632------6565413589------998998248636889999998669531168877554
Q ss_pred --------CCCCEEEECCCCCCHHHHHHHHHHCCCCEEEEEECCCHHHHCCCCE--EECCCCCCCCCCHHHHHHHHCHHH
Q ss_conf --------5221001036652018999999965993699941242232015851--400786546778658354427777
Q gi|254780342|r 165 --------SLKGFRLIEASELASFSQIRRDQRNNIPAVFLSWEPHPINSDLNIH--YLPGGEEISGFGEASVYTVVRSDY 234 (309)
Q Consensus 165 --------~~~~~~~~~~s~~~~~a~l~~A~~~~~~~v~~~wsp~~~~~~~dl~--~Ledp~~~~~~p~~~~~~vv~~~~ 234 (309)
....+++.+...+ .+.+++ ++.++...|.+...-...+.. .+.++.. +|....++|++
T Consensus 158 ~t~~di~~n~~~l~~~~~~~~----~l~~~l--~dvD~avi~~~~~~~agl~~~~~l~~e~~~-----~y~nvivvr~~- 225 (275)
T 3gxa_A 158 ASKADIAENLKNIKIVELEAA----QLPRSR--ADVDFAVVNGNYAISSGMKLTEALFQEPSF-----AYVNWSAVKTA- 225 (275)
T ss_dssp CCGGGEEECTTCCEEEEECGG----GHHHHT--TTSSEEEECHHHHHHTTCCGGGCSEECCCC-----TTCCEEEEEGG-
T ss_pred CCCCHHHHCCCCCEEEECCHH----HHHHHC--CCCCEEEECCCHHHHCCCCHHHCCCCCCCC-----CEEEEEEEECC-
T ss_conf 540004327656459985666----631312--675589964646877599823400027787-----63699998076-
Q ss_pred HHHCHHHHHHHHHCCCCHHHHHHHHHH
Q ss_conf 874889999987408998999999999
Q gi|254780342|r 235 LDKCPNISRLLKNIKFSVALENEMMKL 261 (309)
Q Consensus 235 ~~~~P~~~~~L~~~~ls~~~~~~l~~~ 261 (309)
-++.|.+.++++.+ ..+++......
T Consensus 226 ~~d~~~ik~l~ea~--~s~ev~~~i~~ 250 (275)
T 3gxa_A 226 DKDSQWLKDVTEAY--NSDAFKAYAHK 250 (275)
T ss_dssp GTTCHHHHHHHHHT--TSHHHHHHHHH
T ss_pred CCCCHHHHHHHHHH--CCHHHHHHHHH
T ss_conf 77959999999997--69999999998