HHsearch results for GI: 254780342 and protein with PDBid: 3l6g_A
>3l6g_A Betaine ABC transporter permease and substrate BI protein; glycine betaine binding, substrate binding domain, venus FLY cell membrane; HET: B3P; 1.90A {Lactococcus lactis} PDB: 3l6h_A
Probab=100.00 E-value=0 Score=375.62 Aligned_cols=255 Identities=20% Similarity=0.332 Sum_probs=234.6
Q ss_pred CCEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCCEEEECC
Q ss_conf 83799425886999999999999961069848998564057888851498139998404641356666553047023013
Q gi|254780342|r 26 TPVRFADTGWTDIAATTAMTSVILEEILGYKTNIKLLAVPVTFRSLKNKGIDIFMGYWYPSLEKFIAPYLEEGSIKLVAE 105 (309)
Q Consensus 26 ~~I~ig~~~wte~~v~a~i~~~iLE~~lGy~Ve~~~~~~~~~~~al~~G~iD~~~e~w~p~~~~~~~~~~~~~~~~~~~~ 105 (309)
++|+||+++|||++++++|++++||+ +||+||++.+++.++|+||++|+||+++|+|.|..+..+.... ++.++.++.
T Consensus 2 k~i~i~~~~wt~~~~~a~i~~~~Le~-~Gy~Ve~~~~~~~~~~~al~~G~iDi~~e~w~~~~~~~~~~~~-~~~~~~~~~ 79 (256)
T 3l6g_A 2 KKVDLVYMNWDSEVASINVLTQAMKE-HGFDVKTTALDNAVAWQTVANGQADGMVSAWLPNTHKTQWQKY-GKSVDLLGP 79 (256)
T ss_dssp EEEEEEECSCHHHHHHHHHHHHHHHH-TTEEEEEEECCHHHHHHHHHTTSSSEEEEEEETTTTHHHHHHH-GGGEEEEEE
T ss_pred CEEEEECCCCCHHHHHHHHHHHHHHH-CCCCEEEEECCCHHHHHHHHCCCCCEEEECCCCHHHHHHHHHC-CCCEEECCC
T ss_conf 74899326984799999999999998-6994599878848999999879982985114324556667632-676588022
Q ss_pred CCCCCEEEEEEEHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHH
Q ss_conf 56685356786344641234553565555665442013578543200555876640354522100103665201899999
Q gi|254780342|r 106 NLQGAKYMLAVNDVGFALGIKSYQDIAKYKKELGAKIYGIEPGNEGNQRILDMINNNKFSLKGFRLIEASELASFSQIRR 185 (309)
Q Consensus 106 ~~~~~~~~~~v~~~~~~~~i~~~~dl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~s~~~~~a~l~~ 185 (309)
.+.++..+|+||+|. ++++++||.++... .+.|++++++++......+..+++ +..+.+..++.++|.+++++
T Consensus 80 ~~~~~~~g~~vp~~~---~i~si~dl~~~~~~---~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~a~~~~ 152 (256)
T 3l6g_A 80 NLKGAKVGFVVPSYM---NVNSIEDLTNQANK---TITGIEPGAGVMAASEKTLNSYDN-LKDWKLVPSSSGAMTVALGE 152 (256)
T ss_dssp EEEEEEEEEEEETTS---CCCBGGGCSSGGGG---EEECCCTTCHHHHHHHHHHTTCGG-GTTCEEECCCHHHHHHHHHH
T ss_pred CCCCCEEEEEECCCC---CCCCHHHHHHHHHH---CCCCCCCCCCCCCCCHHHHHHCCC-CCCCEEECCCCHHHHHHHHH
T ss_conf 467862689875512---40257787656640---443678654424113767754034-54431204650778999999
Q ss_pred HHHCCCCEEEEEECCCHHHHCCCCEEECCCCCCCCCCHHHHHHHHCHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHHC
Q ss_conf 99659936999412422320158514007865467786583544277778748899999874089989999999999845
Q gi|254780342|r 186 DQRNNIPAVFLSWEPHPINSDLNIHYLPGGEEISGFGEASVYTVVRSDYLDKCPNISRLLKNIKFSVALENEMMKLILNN 265 (309)
Q Consensus 186 A~~~~~~~v~~~wsp~~~~~~~dl~~Ledp~~~~~~p~~~~~~vv~~~~~~~~P~~~~~L~~~~ls~~~~~~l~~~v~~~ 265 (309)
|+++|+|+++++|+|||++.+|+|++|+||++.+ +|++++.+++|++|+++||+++++|++++||+++|++||++|+ +
T Consensus 153 A~~~~~~~v~~~w~p~~~~~~~~l~~LeDp~~~~-~~~~~~~~v~~~~~~~~~P~~~~~L~~~~lt~~~~~~l~~~v~-~ 230 (256)
T 3l6g_A 153 AIKQHKDIVITGWSPHWMFNKYDLKYLADPKGTM-GTSENINTIVRKGLKKENPEAYKVLDKFNWTTKDMEAVMLDIQ-N 230 (256)
T ss_dssp HHHTTCCCCEEEEESCTHHHHSCEEECBCTTCTT-CCCEEEEEEEETTHHHHCHHHHHHHHHCCCCHHHHHHHHHHHH-T
T ss_pred HHHCCCCEEEEECCCCHHHHHCCEEEECCCCHHC-CCCCCCCEEECHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHHH-C
T ss_conf 9764797799950670665408647816763001-3234553310134443298999999867899999999999998-5
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 99989999999998599999875475
Q gi|254780342|r 266 KQDRQFVGRTMLRTHPDLLKNWLIGV 291 (309)
Q Consensus 266 g~~~~~vA~~wL~~n~~~~~~Wl~~~ 291 (309)
|++|++||++||++|+++|++||+|.
T Consensus 231 g~~~~~vA~~wL~~n~~~~~~Wl~~~ 256 (256)
T 3l6g_A 231 GKTPEEAAKNWIKDHQKEVDKWFKGS 256 (256)
T ss_dssp TCCHHHHHHHHHHHTHHHHHGGGSCC
T ss_pred CCCHHHHHHHHHHHCHHHHHHHHCCC
T ss_conf 99999999999998979999986759