HHsearch results for GI: 254780342 and protein with PDBid: 3mpk_A
>3mpk_A Virulence sensor protein BVGS; venus flytrap, sensor domain, signaling protein; 2.04A {Bordetella pertussis} PDB: 3mpl_A
Probab=96.77 E-value=0.025 Score=33.57 Aligned_cols=201 Identities=8% Similarity=0.024 Sum_probs=108.8
Q ss_pred CCCCEEEECC-CC---C---HH----HHHHHHHHHHHHHCCCCEEEEEECC-HHHHHHHHHCCCCEEEEEEECCCCHHHH
Q ss_conf 5883799425-88---6---99----9999999999961069848998564-0578888514981399984046413566
Q gi|254780342|r 24 SCTPVRFADT-GW---T---DI----AATTAMTSVILEEILGYKTNIKLLA-VPVTFRSLKNKGIDIFMGYWYPSLEKFI 91 (309)
Q Consensus 24 ~~~~I~ig~~-~w---t---e~----~v~a~i~~~iLE~~lGy~Ve~~~~~-~~~~~~al~~G~iD~~~e~w~p~~~~~~ 91 (309)
+..+|++|.. +| + +. -+...++.++.+ .+|++++.++.. ...++.+|.+|++|+......+...
T Consensus 30 ~~~~l~v~~~~~~~P~~~~~~~g~~~G~~~dll~~i~~-~lg~~~~~~~~~~~~~~~~~l~~g~~Di~~~~~~t~~r--- 105 (267)
T 3mpk_A 30 DHPVVKVAVLNLFAPFTLFRTDEQFGGISAAVLQLLQL-RTGLDFEIIGVDTVEELIAKLRSGEADMAGALFVNSAR--- 105 (267)
T ss_dssp HCSEEEEEEETEETTTEECCTTCCCBSHHHHHHHHHHH-HHCCEEEEEEESSHHHHHHHHHHTSCSEEEEEECCGGG---
T ss_pred HCCEEEEEECCCCCCCEEECCCCCEEEHHHHHHHHHHH-HHCCCEEEEEECCHHHHHHHHHCCCEEEEECCCCCHHH---
T ss_conf 29939999848989956998999887789999999999-84995799982899999998636966599647899889---
Q ss_pred HHHHHCCCEEEECCCCCCCEEEEEEEHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEE
Q ss_conf 66553047023013566853567863446412345535655556654420135785432005558766403545221001
Q gi|254780342|r 92 APYLEEGSIKLVAENLQGAKYMLAVNDVGFALGIKSYQDIAKYKKELGAKIYGIEPGNEGNQRILDMINNNKFSLKGFRL 171 (309)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~i~~~~dl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~ 171 (309)
...+.. ...+......+++++. .+.+.++.+| ++..+|+..++.... .+....... ++
T Consensus 106 -----~~~~~~-s~p~~~~~~~~v~~~~--~~~~~~~~~l-------~g~~i~~~~g~~~~~----~l~~~~~~~---~i 163 (267)
T 3mpk_A 106 -----ESFLSF-SRPYVRNGMVIVTRQD--PDAPVDADHL-------DGRTVALVRNSAAIP----LLQRRYPQA---KV 163 (267)
T ss_dssp -----TTTEEE-CSCSEEECEEEEEESS--TTSCSSGGGC-------TTCEEEEETTCTHHH----HHHHHCTTS---EE
T ss_pred -----HHCCCC-CCCEECCCEEEEEECC--CCCCCCHHHH-------CCCCEEEECCCHHHH----HHHHHCCCC---EE
T ss_conf -----840776-7621304404542014--4345798896-------587305541540569----999728874---17
Q ss_pred ECCCCCCHHHHHHHHHHCCCCEEEEEECCC--HHHHCCCC---EEECCCCCCCCCCHHHHHHHHCHHHHHHCHHHHHHHH
Q ss_conf 036652018999999965993699941242--23201585---1400786546778658354427777874889999987
Q gi|254780342|r 172 IEASELASFSQIRRDQRNNIPAVFLSWEPH--PINSDLNI---HYLPGGEEISGFGEASVYTVVRSDYLDKCPNISRLLK 246 (309)
Q Consensus 172 ~~~s~~~~~a~l~~A~~~~~~~v~~~wsp~--~~~~~~dl---~~Ledp~~~~~~p~~~~~~vv~~~~~~~~P~~~~~L~ 246 (309)
+.-+. ..++.+++.+|+.+++....+. +.+.+..+ ++... ...++..+...+++ ++|++.+.++
T Consensus 164 ~~~~~---~~~~l~~L~~GrvDa~i~~~~~~~~~l~~~~~~~~~v~~~----~~~~~~~~~~~~~k----~~~~L~~~in 232 (267)
T 3mpk_A 164 VTADN---PSEAMLMVANGQADAVVQTQISASYYVNRYFAGKLRIASA----LDLPPAEIALATTR----GQTELMSILN 232 (267)
T ss_dssp EEESS---HHHHHHHHHHTSCSEEEEEHHHHHHHHHHHCTTTEEEEEE----CSSCCEEEEEEEET----TCHHHHHHHH
T ss_pred EEECC---HHHHHHHHHCCCCCEEECCHHHHHHHHHHCCCCCEEEEEC----CCCCCEEEEEEEEC----CCHHHHHHHH
T ss_conf 99806---8987789887986768427999999998389997699504----67775269999948----9999999999
Q ss_pred HC--CCCHHHHHHHHHH
Q ss_conf 40--8998999999999
Q gi|254780342|r 247 NI--KFSVALENEMMKL 261 (309)
Q Consensus 247 ~~--~ls~~~~~~l~~~ 261 (309)
+. +|+.+++.++..+
T Consensus 233 ~~L~~l~~~~~~~I~~k 249 (267)
T 3mpk_A 233 KALYSISNDELASIISR 249 (267)
T ss_dssp HHHHTSCHHHHHHHHHT
T ss_pred HHHHHCCHHHHHHHHHH
T ss_conf 99997085599999998