HHsearch results for GI: 254780342 and protein with PDBid: 3n5l_A
>3n5l_A Binding protein component of ABC phosphonate TRAN; structural genomics, joint center for structural genomics; HET: UNL; 1.97A {Pseudomonas aeruginosa}
Probab=97.97 E-value=0.00021 Score=47.09 Aligned_cols=176 Identities=11% Similarity=0.051 Sum_probs=98.7
Q ss_pred CCCCEEEECCCCCHHHHHHHHHHH---HHHHCCCCEEEEEEC-CHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCC
Q ss_conf 588379942588699999999999---996106984899856-4057888851498139998404641356666553047
Q gi|254780342|r 24 SCTPVRFADTGWTDIAATTAMTSV---ILEEILGYKTNIKLL-AVPVTFRSLKNKGIDIFMGYWYPSLEKFIAPYLEEGS 99 (309)
Q Consensus 24 ~~~~I~ig~~~wte~~v~a~i~~~---iLE~~lGy~Ve~~~~-~~~~~~~al~~G~iD~~~e~w~p~~~~~~~~~~~~~~ 99 (309)
+.++|+||.....++..+...+.- .|++.+|++|++... +...+.++|.+|++|+..-. |. .... ......
T Consensus 2 d~~~l~fg~~p~~~~~~~~~~~~pl~~~L~~~lG~~V~~~~~~dy~~~ieal~~g~vDia~~~--~~-~~~~--a~~~~~ 76 (310)
T 3n5l_A 2 DQPVINFGIISTESSQNLKSIWEPFLKDMSQQTGYQVKAFFAPDYAGIIQGMRFDKVDIAWYG--NK-AAME--AVDRAH 76 (310)
T ss_dssp CCCEEEEEECCSSCHHHHHHHHHHHHHHHHHHHSSEEEEECCSSHHHHHHHHHTTSCSEEECC--HH-HHHH--HHHHSC
T ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHCCCCCEEEEC--CH-HHHH--HHHCCC
T ss_conf 998699997789999999999999999999976995799975999999999976998689989--28-9999--986059
Q ss_pred EEEEC--CCC---CCCEEEEEEEHHHHHCCCCCHHHHHHHHHHHHHCCCC-CCCCCCCCHHHH--HHHHHCCCCCC-CEE
Q ss_conf 02301--356---6853567863446412345535655556654420135-785432005558--76640354522-100
Q gi|254780342|r 100 IKLVA--ENL---QGAKYMLAVNDVGFALGIKSYQDIAKYKKELGAKIYG-IEPGNEGNQRIL--DMINNNKFSLK-GFR 170 (309)
Q Consensus 100 ~~~~~--~~~---~~~~~~~~v~~~~~~~~i~~~~dl~~~~~~~~~~~~g-~~~~~~~~~~~~--~~~~~~~l~~~-~~~ 170 (309)
...+. ... .+....++|+. ...+++++||.... ++..++ .++........+ ..+...++... ++.
T Consensus 77 ~~~~~~~~~~~g~~~y~s~liv~~---ds~i~sl~DL~gk~---kg~~~a~~d~~Stsg~l~p~~~l~~~~gi~~~~~f~ 150 (310)
T 3n5l_A 77 GEIFAQTVAASGAPGYWSLLIANK---DSKIDSLEDMLANA---KSLTFGNGDPNSTSGYLVPGYYVFAKNNVDPVKAFK 150 (310)
T ss_dssp EEEEEEEEETTCCSEEEEEEEEET---TCSCCSHHHHHHTG---GGCEEEECCTTCTTTTHHHHHHTTTTTTCCHHHHSS
T ss_pred CEEEEEEECCCCCCCCEEEEEEEC---CCCCCCHHHHHHHC---CCCEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCE
T ss_conf 805665203478876108999968---87766577774100---000002478763278899999999864998400423
Q ss_pred EE-CCCCCCHHHHHHHHHHCCCCEEEEEECCCHHH-------HCCCCEEECC
Q ss_conf 10-36652018999999965993699941242232-------0158514007
Q gi|254780342|r 171 LI-EASELASFSQIRRDQRNNIPAVFLSWEPHPIN-------SDLNIHYLPG 214 (309)
Q Consensus 171 ~~-~~s~~~~~a~l~~A~~~~~~~v~~~wsp~~~~-------~~~dl~~Led 214 (309)
.+ .++ ......|+.+|+.++...+++.+.. ..-+++++.-
T Consensus 151 ~v~~~s----h~~~~~aV~~G~vDaa~~~~~~~~~~~~~~~~~~~~lrvI~~ 198 (310)
T 3n5l_A 151 RTLNSS----HEVNALAVANKQVDVATFNTEGMERLELTQPEKARQLKVIWK 198 (310)
T ss_dssp EEEECC----HHHHHHHHHTTSSSEEEEEHHHHHHHHHHCHHHHTTEEEEEE
T ss_pred EEECCC----HHHHHHHHHCCCCCEEEECHHHHHHHHHHCHHHHHCCEEEEE
T ss_conf 476078----388999998699878985179999999847044516269986