BLAST/PSIBLAST alignment of GI: 254780342 and GI: 159185139 at iteration 1
>gi|159185139|ref|NP_355237.2| ABC transporter, substrate binding protein (proline/glycine betaine) [Agrobacterium tumefaciens str. C58] Length = 317
>gi|159140410|gb|AAK88022.2| ABC transporter, substrate binding protein (proline/glycine betaine) [Agrobacterium tumefaciens str. C58] Length = 317
Score = 294 bits (752), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 143/295 (48%), Positives = 202/295 (68%), Gaps = 3/295 (1%)
Query: 5 LAVCLFLTTFSISYARDADSCTPVRFADTGWTDIAATTAMTSVILEEILGYKTNIKLLAV 64
LA + TFS + A + SC VRF+D GWTDI ATTA +V+L+ LGY+T++KLL+V
Sbjct: 11 LAAAISSMTFSAAVAAEPASCGTVRFSDVGWTDITATTATATVLLKS-LGYETDVKLLSV 69
Query: 65 PVTFRSLKNKGIDIFMGYWYPSLEKFIAPYLEEGSIKLVAENLQGAKYMLAVNDVGFALG 124
PVT+ SLKNK ID+F+G W P++E IAPY ++ S++ + ENL GAKY LA N G LG
Sbjct: 70 PVTYTSLKNKDIDVFLGNWMPTMEGDIAPYRDDKSVETLRENLTGAKYTLATNAKGAELG 129
Query: 125 IKSYQDIAKYKKELGAKIYGIEPGNEGNQRILDMINNNKFSLKGFRLIEASELASFSQIR 184
IK ++DIA + ELG KIYGIEPGN+GN+ ILDM+ + F LK F ++E+SE SQ+
Sbjct: 130 IKDFKDIAAHSSELGGKIYGIEPGNDGNRLILDMVAKDSFGLKSFEVVESSEQGMLSQVA 189
Query: 185 RDQRNNIPAVFLSWEPHPINSDLNIHYLPGGEEISG--FGEASVYTVVRSDYLDKCPNIS 242
R +++ P VFL WEPHP+N++ + YL GG+E+ G FG A++YT VR Y+++CPN+
Sbjct: 190 RAEKSGEPIVFLGWEPHPMNANFKLTYLTGGDEVFGPNFGGATIYTNVRKGYVEECPNVG 249
Query: 243 RLLKNIKFSVALENEMMKLILNNKQDRQFVGRTMLRTHPDLLKNWLIGVTTFDGQ 297
LKN++FS+ +ENE+M ILN+ + + L+ +P ++ W V T DG
Sbjct: 250 AFLKNLQFSLPMENEIMGKILNDGLEGEAAATAWLKANPAAIEPWFANVKTKDGS 304