BLAST/PSIBLAST alignment of GI: 254780342 and GI: 159185139 at iteration 1
>gi|159185139|ref|NP_355237.2| ABC transporter, substrate binding protein (proline/glycine betaine) [Agrobacterium tumefaciens str. C58] Length = 317
>gi|159140410|gb|AAK88022.2| ABC transporter, substrate binding protein (proline/glycine betaine) [Agrobacterium tumefaciens str. C58] Length = 317
 Score =  294 bits (752), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 143/295 (48%), Positives = 202/295 (68%), Gaps = 3/295 (1%)

Query: 5   LAVCLFLTTFSISYARDADSCTPVRFADTGWTDIAATTAMTSVILEEILGYKTNIKLLAV 64
           LA  +   TFS + A +  SC  VRF+D GWTDI ATTA  +V+L+  LGY+T++KLL+V
Sbjct: 11  LAAAISSMTFSAAVAAEPASCGTVRFSDVGWTDITATTATATVLLKS-LGYETDVKLLSV 69

Query: 65  PVTFRSLKNKGIDIFMGYWYPSLEKFIAPYLEEGSIKLVAENLQGAKYMLAVNDVGFALG 124
           PVT+ SLKNK ID+F+G W P++E  IAPY ++ S++ + ENL GAKY LA N  G  LG
Sbjct: 70  PVTYTSLKNKDIDVFLGNWMPTMEGDIAPYRDDKSVETLRENLTGAKYTLATNAKGAELG 129

Query: 125 IKSYQDIAKYKKELGAKIYGIEPGNEGNQRILDMINNNKFSLKGFRLIEASELASFSQIR 184
           IK ++DIA +  ELG KIYGIEPGN+GN+ ILDM+  + F LK F ++E+SE    SQ+ 
Sbjct: 130 IKDFKDIAAHSSELGGKIYGIEPGNDGNRLILDMVAKDSFGLKSFEVVESSEQGMLSQVA 189

Query: 185 RDQRNNIPAVFLSWEPHPINSDLNIHYLPGGEEISG--FGEASVYTVVRSDYLDKCPNIS 242
           R +++  P VFL WEPHP+N++  + YL GG+E+ G  FG A++YT VR  Y+++CPN+ 
Sbjct: 190 RAEKSGEPIVFLGWEPHPMNANFKLTYLTGGDEVFGPNFGGATIYTNVRKGYVEECPNVG 249

Query: 243 RLLKNIKFSVALENEMMKLILNNKQDRQFVGRTMLRTHPDLLKNWLIGVTTFDGQ 297
             LKN++FS+ +ENE+M  ILN+  + +      L+ +P  ++ W   V T DG 
Sbjct: 250 AFLKNLQFSLPMENEIMGKILNDGLEGEAAATAWLKANPAAIEPWFANVKTKDGS 304