Query gi|254780343|ref|YP_003064756.1| probable cation efflux protein [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 311
No_of_seqs 153 out of 2479
Neff 8.0
Searched_HMMs 23785
Date Mon May 30 09:30:41 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780343.hhm -d /home/congqian_1/database/pdb/pdb70.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3h90_A Ferrous-iron efflux pum 100.0 0 0 423.2 20.2 280 10-291 3-282 (283)
2 3byp_A CZRB protein; membrane 99.7 3.2E-17 1.4E-21 126.8 11.2 90 205-294 1-91 (94)
3 2zzt_A Putative uncharacterize 99.6 1.2E-15 5.1E-20 116.8 11.2 95 211-306 7-102 (107)
4 3h90_A Ferrous-iron efflux pum 97.4 0.00034 1.4E-08 44.2 7.0 91 121-211 6-103 (283)
5 1ji6_A Pesticidial crystal pro 58.0 7.6 0.00032 16.6 5.3 16 154-169 206-221 (589)
6 1ghh_A DINI, DNA-damage-induci 53.1 9.1 0.00038 16.1 5.4 32 256-287 12-43 (81)
7 2jp3_A FXYD domain-containing 46.9 11 0.00048 15.5 4.5 37 67-104 6-42 (67)
8 2zxe_G FXYD10, phospholemman-l 44.7 12 0.00052 15.3 4.0 34 67-101 8-41 (74)
9 1u8s_A Glycine cleavage system 39.6 15 0.00062 14.8 6.4 71 211-291 102-180 (192)
10 2ns6_A Mobilization protein A; 32.1 19 0.00082 14.0 5.4 43 244-286 69-112 (185)
11 2j8s_A ACRB, acriflavine resis 25.5 25 0.0011 13.3 14.0 28 248-275 573-600 (1055)
12 1mhs_A Proton pump, plasma mem 22.4 21 0.00088 13.8 0.7 15 11-25 690-704 (920)
13 3lmb_A Uncharacterized protein 20.2 15 0.00065 14.7 -0.3 27 264-291 113-139 (165)
No 1
>3h90_A Ferrous-iron efflux pump FIEF; membrane protein, zinc transporter, cell inner membrane, cell membrane, ION transport, iron transport; 2.90A {Escherichia coli k-12} PDB: 2qfi_A
Probab=100.00 E-value=0 Score=423.24 Aligned_cols=280 Identities=25% Similarity=0.461 Sum_probs=269.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999972799999999999999999999999999548998668724146779999896889
Q gi|254780343|r 10 IRMALWGIPISAAITALKIIAWYVTGFISLLSDGLESIVNIITAIISYFTLKYAYRPADNTHPFGHQKAEYIAAVVEGLL 89 (311)
Q Consensus 10 ~r~~~~~~~~n~~~~~~k~~~g~~t~S~allada~~s~~D~~~~~~~l~~~~~s~k~~d~~~pyG~~r~E~l~~l~~~~~ 89 (311)
.|.+++++.+|.+++++|+++|++|||.||+||++||+.|++++++++++.+.++||||++|||||+|+|++++++++++
T Consensus 3 ~r~~~~~~~~n~~l~~~k~~~g~~tgS~allaDa~hs~~D~~~~~i~l~~~~~s~r~~d~~~pyG~~r~E~l~~l~~~~~ 82 (283)
T 3h90_A 3 SRAAIAATAMASLLLLIKIFAWWYTGSVSILAALVDSLVDIGASLTNLLVVRYSLQPADDNHSFGHGKAESLAALAQSMF 82 (283)
T ss_dssp CTHHHHHHHHHHTTHHHHHHSSCSSSSSCCCSTTTHHHHHHHHHHHHHHHHHHHTCCCCSSCSSCSTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 78999999999999999999999980799999999999999999999999998269987569984034507999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99988999999999986300223221026788887201246799999874103305778759986653788788888776
Q gi|254780343|r 90 MTNIALIILYESWHNMSHSPSNDFSIMGLFIGFMANIISLFWGKWLIYSGEKNHSAAFKANGQHFVADVVMSAGVLCGLL 169 (311)
Q Consensus 90 l~~~~~~i~~es~~~l~~~~~~~~~~~~~~i~~~~~~v~~~~~~~~~~~~~~~~s~~l~a~~~~~~~D~~~s~~vii~~~ 169 (311)
+++.++++++|+++++++|++.....+++.+.+++.+++.+++++..+.+++.+|++++++++|+++|+++|+++++|.+
T Consensus 83 l~~~~~~~~~~ai~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~a~~~~~~~D~~~s~~vl~~~~ 162 (283)
T 3h90_A 83 ISGSALFLFLTGIQHLISPTPMTDPGVGVIVTIVALICTIILVSFQRWVVRRTQSQAVRADMLHYQSDVMMNGAILLALG 162 (283)
T ss_dssp HHHHHHHHHHHHHHTSSSSCCCCCCCCCTHHHHHHHHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHCCCSCSCSSSC
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999985233466776444787642232689999887652135786677778887536987759999999
Q ss_pred HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCEEEEEE
Q ss_conf 53027722468766899999999998999999899740445551458999998641588831151576475579079999
Q gi|254780343|r 170 LVLITEYTVLDSIIACFMACNILYQGCKVISSSIKNLMDAAVKPEHLEKIKNIIALNASGSIGIHDLKIRQAGATFFINF 249 (311)
Q Consensus 170 ~~~~~~~~~~D~i~ai~i~~~i~~~~~~~~~~~~~~Ll~~s~~~~~~~~i~~~i~~~~~~V~~v~~l~~~~~G~~~~v~~ 249 (311)
+.+ ++|+|+||++++++++++++.+++++|++.+.|+|.+||+++.+++++.+ .+.|++.++|++|+|+.|++.++++
T Consensus 163 ~~~-~~~~~~D~i~~l~i~l~i~~~~~~~~~~~~~~Ll~~s~~~~~~~~i~~~i-~~~~~v~~v~~l~~~~~G~~~~v~v 240 (283)
T 3h90_A 163 LSW-YGWHRADALFALGIGIYILYSALRMGYEAVQSLLDRALPDEERQEIIDIV-TSWPGVSGAHDLRTRQSGPTRFIQI 240 (283)
T ss_dssp SCS-TTSCCSTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHH-HHSSSCSEEEEEEEEEETTEEEEEE
T ss_pred HHH-HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH-HCCCCCCEEEEEEEEEECCCEEEEE
T ss_conf 999-49520008999999999999999999999999817899867899999999-7689973058899999889699999
Q ss_pred EEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCC
Q ss_conf 999887999899999999999999987798689999605887
Q gi|254780343|r 250 HLVVDSHMIVLDAHKICNKLERSLEENIGQAIITIHIEPANE 291 (311)
Q Consensus 250 ~i~v~~~~~~~eah~i~~~ie~~l~~~~~~~~v~ih~ep~~~ 291 (311)
|+++|+++|++|+|++++++|+.++++++..+++||+|||+.
T Consensus 241 ~i~v~~~~~~~~~~~i~~~ie~~l~~~~~~~~v~Ih~eP~~~ 282 (283)
T 3h90_A 241 HLEMEDSLPLVQAHMVADQVEQAILRRFPGSDVIIHQDPCSV 282 (283)
T ss_dssp EEECCTTCBHHHHHHHHHHHHHHHHHHSTTCEEEEEEECSCC
T ss_pred EEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC
T ss_conf 999898998999999999999999976799869999478646
No 2
>3byp_A CZRB protein; membrane protein, zinc transporter, transport protein; 1.70A {Thermus thermophilus} SCOP: d.52.9.1 PDB: 3byr_A
Probab=99.73 E-value=3.2e-17 Score=126.77 Aligned_cols=90 Identities=38% Similarity=0.681 Sum_probs=82.7
Q ss_pred HHHCCCCCHHHHHHHHHHHHHC-CCCCCEEEEEEEEEECCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEE
Q ss_conf 7404455514589999986415-888311515764755790799999998879998999999999999999877986899
Q gi|254780343|r 205 NLMDAAVKPEHLEKIKNIIALN-ASGSIGIHDLKIRQAGATFFINFHLVVDSHMIVLDAHKICNKLERSLEENIGQAIIT 283 (311)
Q Consensus 205 ~Ll~~s~~~~~~~~i~~~i~~~-~~~V~~v~~l~~~~~G~~~~v~~~i~v~~~~~~~eah~i~~~ie~~l~~~~~~~~v~ 283 (311)
.|||++++++..++|++.+... .|||.++|++|+|++|+++++++|+.||+++|+.|+|++++++|+.|++++|..+++
T Consensus 1 gLmD~~~~~e~~~~I~~~i~~~~~~~v~~vh~lr~r~~G~~~~vd~~i~v~~~~sv~eaH~i~~~ve~~l~~~~~~~~v~ 80 (94)
T 3byp_A 1 GLMDEGLPPEEVERIRAFLQERIRGRALEVHDLKTRRAGPRSFLEFHLVVRGDTPVEEAHRLCDELERALAQAFPGLQAT 80 (94)
T ss_dssp -----CCCHHHHHHHHHHHHHHHTTTCSEEEEEEEEEETTEEEEEEEEEECTTCBHHHHHHHHHHHHHHHHHHSTTEEEE
T ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEE
T ss_conf 98888889999999999999568998678888888998998999999998999989999999999999999658997799
Q ss_pred EEEECCCCCCC
Q ss_conf 99605887645
Q gi|254780343|r 284 IHIEPANEVTH 294 (311)
Q Consensus 284 ih~ep~~~~~~ 294 (311)
||+||+++...
T Consensus 81 iHveP~~~~~~ 91 (94)
T 3byp_A 81 IHVEPEGERKR 91 (94)
T ss_dssp EEEEECC----
T ss_pred EEECCCCHHHC
T ss_conf 99898983532
No 3
>2zzt_A Putative uncharacterized protein; cation diffusion facilitator (CDF), transporter, zinc, membrane protein, cytosolic domain; 2.84A {Thermotoga maritima}
Probab=99.65 E-value=1.2e-15 Score=116.82 Aligned_cols=95 Identities=24% Similarity=0.378 Sum_probs=82.3
Q ss_pred CCHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCC-CCEEEEEEECC
Q ss_conf 55145899999864158883115157647557907999999988799989999999999999998779-86899996058
Q gi|254780343|r 211 VKPEHLEKIKNIIALNASGSIGIHDLKIRQAGATFFINFHLVVDSHMIVLDAHKICNKLERSLEENIG-QAIITIHIEPA 289 (311)
Q Consensus 211 ~~~~~~~~i~~~i~~~~~~V~~v~~l~~~~~G~~~~v~~~i~v~~~~~~~eah~i~~~ie~~l~~~~~-~~~v~ih~ep~ 289 (311)
.|++..++|++++ .+.|+|.++|++|+|++|+.+++++|++||+++|+.++|+|++++|+.|++++| +.+++||+||+
T Consensus 7 ~D~e~~~~I~~i~-~~~pgV~~Vh~lr~r~~G~~~~vd~hI~Vd~~~sv~eaH~I~~~Ie~~I~~~~p~v~~v~IHveP~ 85 (107)
T 2zzt_A 7 TELDMYDDIFAVL-ERFPNVHNPHRVRIRRVGTKYFIEMDIEVDGKMSVKDAHELTVKIRKEMLKRRDDIEDVTIHVEPL 85 (107)
T ss_dssp HHHHHHHHHHHHH-TTCSSCEEEEEEEEECSCC-CEEEEEEEECTTSCHHHHHHHHHHHHHHHHHHCTTCCEEEEEEEET
T ss_pred CCHHHHHHHHHHH-HCCCCEEEEEEEEEEEECCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC
T ss_conf 2999999999999-729990231258899989969999999989999699999999999999998789973899997888
Q ss_pred CCCCCCCCCCCCHHHHH
Q ss_conf 87645554888314565
Q gi|254780343|r 290 NEVTHGIHVPLKENKNQ 306 (311)
Q Consensus 290 ~~~~~~~~~~~~e~~~~ 306 (311)
+..+......-|.+..+
T Consensus 86 ~~~~ee~~~~~~g~~~~ 102 (107)
T 2zzt_A 86 GNVEEEGFGLKKGEKKH 102 (107)
T ss_dssp TC---------------
T ss_pred CCCCCCCCCCCCCCCCC
T ss_conf 88987756767555444
No 4
>3h90_A Ferrous-iron efflux pump FIEF; membrane protein, zinc transporter, cell inner membrane, cell membrane, ION transport, iron transport; 2.90A {Escherichia coli k-12} PDB: 2qfi_A
Probab=97.45 E-value=0.00034 Score=44.17 Aligned_cols=91 Identities=14% Similarity=-0.015 Sum_probs=73.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-------CCCHHHHHHHHHHHHHHHHH
Q ss_conf 88872012467999998741033057787599866537887888887765302-------77224687668999999999
Q gi|254780343|r 121 GFMANIISLFWGKWLIYSGEKNHSAAFKANGQHFVADVVMSAGVLCGLLLVLI-------TEYTVLDSIIACFMACNILY 193 (311)
Q Consensus 121 ~~~~~~v~~~~~~~~~~~~~~~~s~~l~a~~~~~~~D~~~s~~vii~~~~~~~-------~~~~~~D~i~ai~i~~~i~~ 193 (311)
...+.++|..++..+.-.+--.+|.++.+++.|+..|.++++.++++.-...- +|+.-++++++++.+.+++.
T Consensus 6 ~~~~~~~n~~l~~~k~~~g~~tgS~allaDa~hs~~D~~~~~i~l~~~~~s~r~~d~~~pyG~~r~E~l~~l~~~~~l~~ 85 (283)
T 3h90_A 6 AIAATAMASLLLLIKIFAWWYTGSVSILAALVDSLVDIGASLTNLLVVRYSLQPADDNHSFGHGKAESLAALAQSMFISG 85 (283)
T ss_dssp HHHHHHHHHTTHHHHHHSSCSSSSSCCCSTTTHHHHHHHHHHHHHHHHHHHTCCCCSSCSSCSTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999980799999999999999999999999998269987569984034507999999999999
Q ss_pred HHHHHHHHHHHHHHCCCC
Q ss_conf 989999998997404455
Q gi|254780343|r 194 QGCKVISSSIKNLMDAAV 211 (311)
Q Consensus 194 ~~~~~~~~~~~~Ll~~s~ 211 (311)
.+..++.++...|+...+
T Consensus 86 ~~~~~~~~ai~~l~~~~~ 103 (283)
T 3h90_A 86 SALFLFLTGIQHLISPTP 103 (283)
T ss_dssp HHHHHHHHHHHTSSSSCC
T ss_pred HHHHHHHHHHHHHHCCCC
T ss_conf 999999999999852334
No 5
>1ji6_A Pesticidial crystal protein CRY3BB; toxin; 2.40A {Bacillus thuringiensis} SCOP: b.18.1.3 b.77.2.1 f.1.3.1
Probab=58.01 E-value=7.6 Score=16.62 Aligned_cols=16 Identities=19% Similarity=0.239 Sum_probs=5.9
Q ss_pred HHHHHHHHHHHHHHHH
Q ss_conf 6653788788888776
Q gi|254780343|r 154 FVADVVMSAGVLCGLL 169 (311)
Q Consensus 154 ~~~D~~~s~~vii~~~ 169 (311)
.+.++-.++.=++++.
T Consensus 206 yrr~mtl~VLD~valf 221 (589)
T 1ji6_A 206 FRREMTLTVLDLIVLF 221 (589)
T ss_dssp HHHHHHHHTHHHHTTG
T ss_pred HHHHHHHHHHHHHHHH
T ss_conf 9999999999999750
No 6
>1ghh_A DINI, DNA-damage-inducible protein I; bicelle, dipolar coupling, liquid crystal, PF1, RECA, protein binding; NMR {Escherichia coli} SCOP: d.57.1.1
Probab=53.07 E-value=9.1 Score=16.11 Aligned_cols=32 Identities=6% Similarity=0.083 Sum_probs=17.0
Q ss_pred CCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEE
Q ss_conf 99989999999999999998779868999960
Q gi|254780343|r 256 HMIVLDAHKICNKLERSLEENIGQAIITIHIE 287 (311)
Q Consensus 256 ~~~~~eah~i~~~ie~~l~~~~~~~~v~ih~e 287 (311)
.++-.-.+.+..+++++|..+||..++.|.+-
T Consensus 12 ~lp~ga~~AL~~EL~kRl~~~fPD~~~~V~Vr 43 (81)
T 1ghh_A 12 PLPAGAIDALAGELSRRIQYAFPDNEGHVSVR 43 (81)
T ss_dssp CCCTTHHHHHHHHHHHHHHHHCSSSCCEEEEE
T ss_pred CCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEE
T ss_conf 89821899999999998660489986318986
No 7
>2jp3_A FXYD domain-containing ION transport regulator 4; protein, transcription; NMR {Rattus norvegicus}
Probab=46.86 E-value=11 Score=15.50 Aligned_cols=37 Identities=5% Similarity=0.134 Sum_probs=26.3
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 98668724146779999896889999889999999999
Q gi|254780343|r 67 ADNTHPFGHQKAEYIAAVVEGLLMTNIALIILYESWHN 104 (311)
Q Consensus 67 ~d~~~pyG~~r~E~l~~l~~~~~l~~~~~~i~~es~~~ 104 (311)
.|..|.|-|+++. +++++.+.+++.+|+.++...=.+
T Consensus 6 ~d~pF~YDy~tLR-igGLi~a~vlf~~GiliilS~kcr 42 (67)
T 2jp3_A 6 KGSPFYYDWESLQ-LGGLIFGGLLCIAGIALALSGKCK 42 (67)
T ss_dssp TTSGGGGGGHHHH-HHHHHHHHHHHHHHHHHHHTTHHH
T ss_pred CCCCCCCCHHHHE-ECCCHHHHHHHHHHHHHHHCCCCC
T ss_conf 5898614317841-434157999999999999868620
No 8
>2zxe_G FXYD10, phospholemman-like protein; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_G*
Probab=44.66 E-value=12 Score=15.28 Aligned_cols=34 Identities=15% Similarity=0.353 Sum_probs=25.7
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 98668724146779999896889999889999999
Q gi|254780343|r 67 ADNTHPFGHQKAEYIAAVVEGLLMTNIALIILYES 101 (311)
Q Consensus 67 ~d~~~pyG~~r~E~l~~l~~~~~l~~~~~~i~~es 101 (311)
.|+.|.|-|+++. +++|+.+.+++.+|+.++...
T Consensus 8 ~~dpF~YDy~tLR-igGLi~a~vLf~~GI~iils~ 41 (74)
T 2zxe_G 8 NDERFTYDYYRLR-VVGLIVAAVLCVIGIIILLAG 41 (74)
T ss_dssp CGGGGCCCHHHHH-HHHHHHHHHHHHHHHHHHTTT
T ss_pred CCCCCCCCHHHHH-CCCCHHHHHHHHHHHHHHHCC
T ss_conf 6898514327850-322067999999999999848
No 9
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5
Probab=39.56 E-value=15 Score=14.79 Aligned_cols=71 Identities=17% Similarity=0.197 Sum_probs=41.4
Q ss_pred CCHHHHHHHHHHHHHCCCCCCEEEEEEEEEECC--------EEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEE
Q ss_conf 551458999998641588831151576475579--------079999999887999899999999999999987798689
Q gi|254780343|r 211 VKPEHLEKIKNIIALNASGSIGIHDLKIRQAGA--------TFFINFHLVVDSHMIVLDAHKICNKLERSLEENIGQAII 282 (311)
Q Consensus 211 ~~~~~~~~i~~~i~~~~~~V~~v~~l~~~~~G~--------~~~v~~~i~v~~~~~~~eah~i~~~ie~~l~~~~~~~~v 282 (311)
..+..+.+|.+.++... .++.++++...|. .+.+++.+.+|.+.+.. ++.+++++.. ++.+ .++
T Consensus 102 DrpGlL~~It~~la~~~---inI~~l~~~t~~~~~~~~~~~~f~~~~~i~vp~~~d~~---~l~~~L~~L~-~el~-vDi 173 (192)
T 1u8s_A 102 DKLGLTEKFTQFFAQRQ---IGMASLSAQTISKDKLHSEQNQFHIAISARVDSGCNLM---QLQEEFDALC-TALD-VQG 173 (192)
T ss_dssp CCTTHHHHHHHHHHHTT---CCEEEEEEEEEC--------CEEEEEEEEEECTTSCHH---HHHHHHHHHH-HHHT-CEE
T ss_pred CCCCHHHHHHHHHHHCC---CCCCEEEEEECCCCCCCCCCCEEEEEEEEECCCCCCHH---HHHHHHHHHH-HHHC-CEE
T ss_conf 76268999999998679---97005899842677667778579999999579999999---9999999999-9859-679
Q ss_pred EEEEECCCC
Q ss_conf 999605887
Q gi|254780343|r 283 TIHIEPANE 291 (311)
Q Consensus 283 ~ih~ep~~~ 291 (311)
-+||...
T Consensus 174 --~i~~~~~ 180 (192)
T 1u8s_A 174 --SLNFIKN 180 (192)
T ss_dssp --EEEEEEC
T ss_pred --EEEECCC
T ss_conf --9997647
No 10
>2ns6_A Mobilization protein A; nickase, 5-strand antiparallel beta sheet, metalloenzyme, hydrolase; 2.10A {Pseudomonas aeruginosa}
Probab=32.07 E-value=19 Score=14.03 Aligned_cols=43 Identities=9% Similarity=0.227 Sum_probs=32.0
Q ss_pred EEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCC-CCEEEEEE
Q ss_conf 07999999988799989999999999999998779-86899996
Q gi|254780343|r 244 TFFINFHLVVDSHMIVLDAHKICNKLERSLEENIG-QAIITIHI 286 (311)
Q Consensus 244 ~~~v~~~i~v~~~~~~~eah~i~~~ie~~l~~~~~-~~~v~ih~ 286 (311)
...-++.+.+|.+++.++-.++..+.-+.+....+ ..++.||=
T Consensus 69 ~lare~~iALP~EL~~e~~~~l~~~f~~~~f~~~G~~~d~aIH~ 112 (185)
T 2ns6_A 69 RLFKEVEFALPVELTLDQQKALASEFAQHLTGAERLPYTLAIHA 112 (185)
T ss_dssp CCEEEEEEECCTTSCHHHHHHHHHHHHHHHHTTTTCCEEEEEEE
T ss_pred EEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEC
T ss_conf 68999999787305999999999999999997069479999857
No 11
>2j8s_A ACRB, acriflavine resistance protein B; membrane protein/complex, designed ankyrin repeat protein, multidrug resistance protein; HET: LMT LMU; 2.54A {Escherichia coli} PDB: 2dhh_A 1iwg_A 2dr6_A* 2drd_A* 2hqf_A 2hqg_A 2hqd_A 2hqc_A 2i6w_A 1oy6_A* 1oy9_A* 1oyd_A* 1oy8_A* 1oye_A 2rdd_A* 2w1b_A* 3d9b_A 1t9x_A* 1t9t_A* 1t9v_A* ...
Probab=25.48 E-value=25 Score=13.31 Aligned_cols=28 Identities=7% Similarity=-0.014 Sum_probs=11.9
Q ss_pred EEEEEECCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 9999988799989999999999999998
Q gi|254780343|r 248 NFHLVVDSHMIVLDAHKICNKLERSLEE 275 (311)
Q Consensus 248 ~~~i~v~~~~~~~eah~i~~~ie~~l~~ 275 (311)
.+.+..|+..+.++.+++.+++|+.+.+
T Consensus 573 ~v~v~~p~gtsle~t~~v~~~ie~~l~~ 600 (1055)
T 2j8s_A 573 MTMVQLPAGATQERTQKVLNEVTHYYLT 600 (1055)
T ss_dssp EEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 9999868986089999999999999861
No 12
>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1
Probab=22.36 E-value=21 Score=13.84 Aligned_cols=15 Identities=13% Similarity=0.308 Sum_probs=7.1
Q ss_pred HHHHHHHHHHHHHHH
Q ss_conf 999999999999999
Q gi|254780343|r 11 RMALWGIPISAAITA 25 (311)
Q Consensus 11 r~~~~~~~~n~~~~~ 25 (311)
+...+.+..|+.+.+
T Consensus 690 ~~i~~~l~~ni~~~~ 704 (920)
T 1mhs_A 690 AYVVYRIALSIHLEI 704 (920)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
T ss_conf 999999999999999
No 13
>3lmb_A Uncharacterized protein; protein OLEI01261, unknown function, chlorobaculum tepidum TLS, structural genomics, PSI2, MCSG; HET: MSE; 2.10A {Chlorobaculum tepidum}
Probab=20.18 E-value=15 Score=14.68 Aligned_cols=27 Identities=19% Similarity=0.244 Sum_probs=16.0
Q ss_pred HHHHHHHHHHHHHCCCCEEEEEEECCCC
Q ss_conf 9999999999987798689999605887
Q gi|254780343|r 264 KICNKLERSLEENIGQAIITIHIEPANE 291 (311)
Q Consensus 264 ~i~~~ie~~l~~~~~~~~v~ih~ep~~~ 291 (311)
+..+++.+.+.++ +..++++++|=+++
T Consensus 113 e~~~~~~~~l~~~-gr~~~~l~v~v~~~ 139 (165)
T 3lmb_A 113 EELANFFDHFERK-GKARISLEAAIYND 139 (165)
T ss_dssp HHHHHHHHHHHHH-SEEEEEEEEEEESC
T ss_pred HHHHHHHHHHHHC-CCEEEEEEEEEEEC
T ss_conf 7999999999856-98189999999968
Done!