HHSEARCH alignment of GI: 254780343 and SCOP domain: d2qfia1

Alignment
>d2qfia1 d.52.9.1 (A:209-290) Ferrous-iron efflux pump FieF (YiiP) {Escherichia coli [TaxId: 562]}
Probab=99.54  E-value=5.9e-17  Score=123.59  Aligned_cols=81  Identities=28%  Similarity=0.517  Sum_probs=76.3

Q ss_pred             CCCHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECC
Q ss_conf             55514589999986415888311515764755790799999998879998999999999999999877986899996058
Q gi|254780343|r  210 AVKPEHLEKIKNIIALNASGSIGIHDLKIRQAGATFFINFHLVVDSHMIVLDAHKICNKLERSLEENIGQAIITIHIEPA  289 (311)
Q Consensus       210 s~~~~~~~~i~~~i~~~~~~V~~v~~l~~~~~G~~~~v~~~i~v~~~~~~~eah~i~~~ie~~l~~~~~~~~v~ih~ep~  289 (311)
                      ++|+++.++|++.+ ++.|||.++|++|+|++|+..++++|++||+++|+.++|++++++|+.|++++|..+++||+|||
T Consensus         1 alP~e~~~~I~~~i-~~~~gV~~vh~lr~r~~G~~~~vd~hi~v~~~~sv~~aH~I~~~ie~~l~~~~~~~~v~iHveP~   79 (82)
T d2qfia1           1 ALPDEERQEIIDIV-TSWPGVSGAHDLRTRQSGPTRFIQIHLEMEDSLPLVQAHMVADQVEQAILRRFPGSDVIIHQDPC   79 (82)
T ss_dssp             CCCTTHHHHHHHHH-TTSSSCSCBCCCCCCTTSCCBCCBSCTTSTTTCSCGGGHHHHHHHHHHTTSSSCCSSCBCCCCCS
T ss_pred             CCCHHHHHHHHHHH-HCCCCCEEEEEEEEEEECCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCC
T ss_conf             92989999999999-71999234548999996890999999998999999999999999999999768997799980776


Q ss_pred             CC
Q ss_conf             87
Q gi|254780343|r  290 NE  291 (311)
Q Consensus       290 ~~  291 (311)
                      +-
T Consensus        80 ~~   81 (82)
T d2qfia1          80 SV   81 (82)
T ss_dssp             CC
T ss_pred             CC
T ss_conf             45


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Alpha-lytic protease prodomain-like
superfamily: Cation efflux protein cytoplasmic domain-like
family: Cation efflux protein cytoplasmic domain-like
domain: Ferrous-iron efflux pump FieF (YiiP)
species: Escherichia coli [TaxId: 562]