HHSEARCH alignment of GI: 254780343 and SCOP domain: d2qfia2

Alignment

Probab=90.24  E-value=0.00049  Score=41.70  Aligned_cols=87  Identities=15%  Similarity=-0.012  Sum_probs=67.3

Q ss_pred             HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-------CCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf             72012467999998741033057787599866537887888887765302-------77224687668999999999989
Q gi|254780343|r  124 ANIISLFWGKWLIYSGEKNHSAAFKANGQHFVADVVMSAGVLCGLLLVLI-------TEYTVLDSIIACFMACNILYQGC  196 (311)
Q Consensus       124 ~~~v~~~~~~~~~~~~~~~~s~~l~a~~~~~~~D~~~s~~vii~~~~~~~-------~~~~~~D~i~ai~i~~~i~~~~~  196 (311)
                      +.++|..++..+.-.+--.+|.++.+|+.|+..|.++++.++.+.-...-       .|+.-..++++++.+++++..+.
T Consensus        12 ~~~~n~~l~i~~~~~~~~t~S~allada~~s~~D~~~~~~~l~~~~~s~k~~d~~~pyG~~r~E~l~~l~~~~~l~~~~~   91 (204)
T d2qfia2          12 ATAMASLLLLIKIFAWWYTGSVSILAALVDSLVDIGASLTNLLVVRYSLQPADDNHSFGHGKAESLAALAQSMFISGSAL   91 (204)
T ss_dssp             HHGGGTTTTTBTTBCCCCTTSSCCCCCCCTTHHHHHHHHHHHHHHTTSSSSCSTTSSCSCCTHHHHHHHTTTTTTSSSTT
T ss_pred             HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999999999999955299999999999999999999999876079998668864267879999998999999999


Q ss_pred             HHHHHHHHHHHCCC
Q ss_conf             99999899740445
Q gi|254780343|r  197 KVISSSIKNLMDAA  210 (311)
Q Consensus       197 ~~~~~~~~~Ll~~s  210 (311)
                      .++.++...+.+..
T Consensus        92 ~~~~~si~~l~~~~  105 (204)
T d2qfia2          92 FLFLTGIQHLISPT  105 (204)
T ss_dssp             GGGSSCTTSSTTTS
T ss_pred             HHHHHHHHHHHHCC
T ss_conf             99999999997201

SCOP domain information

class: Membrane and cell surface proteins and peptides
fold: Cation efflux protein transmembrane domain-like
superfamily: Cation efflux protein transmembrane domain-like
family: Cation efflux protein transmembrane domain-like
domain: Ferrous-iron efflux pump FieF
species: Escherichia coli [TaxId: 562]