HHsearch alignment of GI: 254780345 and MMDB domain: 1q8c_A_
>1q8c_A (A:) Hypothetical protein Mg027; structural genomics, NUSB, GI 3844637, BSGC structure funded by NIH, protein structure initiative, PSI; 2.00A {Mycoplasma genitalium}
Probab=96.68 E-value=0.012 Score=35.09 Aligned_cols=127 Identities=21% Similarity=0.313 Sum_probs=88.6
Q ss_pred CHHHHHHHHHHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-
Q ss_conf 346999999999999995-699989999999985310013221120144343999999999999989999999997410-
Q gi|254780345|r 15 RRGIARLAAVQALYQIDI-IGCSTTEIISEYETYRFCADTELDVESVYLHVDLEWFRVIIHGVMDRKQHIDLLISSCLT- 92 (170)
Q Consensus 15 ~r~~aR~~aiq~Ly~~~~-~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~d~~~~~~lv~~v~~~~~~id~~I~~~l~- 92 (170)
.|+..|.+++..+|...| -....+.+-..|.++.- .+..+ -.|-+.+|....++.-.....|...--
T Consensus 13 trtqrriaivefif~~lfflpk~a~~iqa~fl~yd~-------~er~l----n~wqk~ivk~fse~~~~f~~~ie~qq~~ 81 (151)
T 1q8c_A 13 TRTQRRIAVVEFIFSLLFFLPKEAEVIQADFLEYDT-------KERQL----NEWQKLIVKAFSENIFSFQKKIEEQQLK 81 (151)
T ss_dssp CHHHHHHHHHHHHHHHGGGCCCCHHHHHHHHHHTCC-------TTTCC----CHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHC-------CHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 499999999999999881885328999999998410-------01156----7899999999999999999998877688
Q ss_pred ---------CCCCHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHH
Q ss_conf ---------3576332353489999999999864355781033988999999833877231499999999
Q gi|254780345|r 93 ---------EKWSFSRLDMILCSILRAGVLELIECHSVPVEVIISEYVCIAHDFFYGDEPKFINAVLDKV 153 (170)
Q Consensus 93 ---------~~w~~~rl~~~~~~iLr~a~~El~~~~~~p~~vvInE~V~lak~f~~~~~~~fVNaVL~ki 153 (170)
.+.+-++++..-.++..+|+.|.. ...+..+..|+|++-+-..|+...+.+-..|.||++
T Consensus 82 nq~eiq~kynkisgkkidllt~avilcalseq~-a~~tdkplliseallimdhysq~~ekkqthalldkl 150 (151)
T 1q8c_A 82 NQLEIQTKYNKISGKKIDLLTTAVVLCALSEQK-AHNTDKPLLISEALLIMDHYSQGAEKKQTHALLDKL 150 (151)
T ss_dssp CCCSCCCC--------CCHHHHHHHHHHHHHHH-HHCCCHHHHHHHHHHHHHHTTCCCTTSCSCTTTSCC
T ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH-CCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHH
T ss_conf 899988875279787723999999999999981-369997420999999999868985167899999850