HHsearch alignment of GI: 254780345 and MMDB domain: 1sqg_A_1-142

>1sqg_A (A:1-142) SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli}
Probab=99.97  E-value=1.3e-29  Score=197.75  Aligned_cols=135  Identities=19%  Similarity=0.216  Sum_probs=122.7

Q ss_pred             CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             32346999999999999995699989999999985310013221120144343999999999999989999999997410
Q gi|254780345|r   13 SHRRGIARLAAVQALYQIDIIGCSTTEIISEYETYRFCADTELDVESVYLHVDLEWFRVIIHGVMDRKQHIDLLISSCLT   92 (170)
Q Consensus        13 ~~~r~~aR~~aiq~Ly~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~d~~~~~~lv~~v~~~~~~id~~I~~~l~   92 (170)
                      +.+|+.+|+.|+|+||+++..+.++++++..+..             .++..|+.|++++++|++++...+|.+|.+++ 
T Consensus         1 M~~~~~~R~~a~~~L~~~~~~~~~~~~~l~~~~~-------------~~~~~d~~~~~~lv~g~~~~~~~ld~~I~~~l-   66 (142)
T 1sqg_A            1 MKKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQ-------------KVSDKDKALLQELCFGVLRTLSQLDWLINKLM-   66 (142)
T ss_dssp             ----CCHHHHHHHHHHHHHHHCCCHHHHHHHHHT-------------TSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred             CCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH-------------HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_conf             9987539999999999999769979999999986-------------39999999999999999987999999999861-


Q ss_pred             CCCCHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCC
Q ss_conf             35763323534899999999998643557810339889999998338772314999999999523332037
Q gi|254780345|r   93 EKWSFSRLDMILCSILRAGVLELIECHSVPVEVIISEYVCIAHDFFYGDEPKFINAVLDKVSRKEEIKRSG  163 (170)
Q Consensus        93 ~~w~~~rl~~~~~~iLr~a~~El~~~~~~p~~vvInE~V~lak~f~~~~~~~fVNaVL~ki~k~~~~~~~~  163 (170)
                       +|+++++++++++|||+|+||+++. ++|++++|||+|++||.|++++++|||||||++++|+.+.....
T Consensus        67 -~~~~~~l~~v~r~iLr~a~~El~~~-~~p~~~vineaV~lak~~~~~~~~~fVNaVLr~i~r~~~~~~~~  135 (142)
T 1sqg_A           67 -ARPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQQEELLAE  135 (142)
T ss_dssp             -SSCCCGGGHHHHHHHHHHHHHHHHC-CSCHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -CCCCCCCCHHHHHHHHHHHHHHHHC-CCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf             -7998643589999999999998735-69863333056655443045443333322456666654332432