HHsearch results for GI: 254780345 and protein with PDBid: 1q8c_A

>1q8c_A Hypothetical protein Mg027; structural genomics, NUSB, GI 3844637, BSGC structure funded by NIH, protein structure initiative, PSI; 2.00A {Mycoplasma genitalium} SCOP: a.79.1.2
Probab=99.96  E-value=1e-29  Score=197.40  Aligned_cols=135  Identities=21%  Similarity=0.217  Sum_probs=106.3

Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             79981323469999999999999956999899999999853100132211201443439999999999999899999999
Q gi|254780345|r    8 KDLKLSHRRGIARLAAVQALYQIDIIGCSTTEIISEYETYRFCADTELDVESVYLHVDLEWFRVIIHGVMDRKQHIDLLI   87 (170)
Q Consensus         8 ~~~~~~~~r~~aR~~aiq~Ly~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~d~~~~~~lv~~v~~~~~~id~~I   87 (170)
                      +++.....|+.+|+.|+|+|||+++++.+..+.+..+.....          .....+..|.+.++.++..+...++..+
T Consensus         6 k~~~~k~tR~~aRe~avQ~Lyq~~~~~~~~~e~i~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~i~~~i   75 (151)
T 1q8c_A            6 KGLTNKLTRTQRRIAVVEFIFSLLFFLPKEAEVIQADFLEYD----------TKERQLNEWQKLIVKAFSENIFSFQKKI   75 (151)
T ss_dssp             ------CCHHHHHHHHHHHHHHHGGGCCCCHHHHHHHHHHTC----------CTTTCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH----------CCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             545545249999999999999988288424889999998610----------0012567899998999999999999986


Q ss_pred             HHH----------HCCCCCHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHH
Q ss_conf             974----------103576332353489999999999864355781033988999999833877231499999999
Q gi|254780345|r   88 SSC----------LTEKWSFSRLDMILCSILRAGVLELIECHSVPVEVIISEYVCIAHDFFYGDEPKFINAVLDKV  153 (170)
Q Consensus        88 ~~~----------l~~~w~~~rl~~~~~~iLr~a~~El~~~~~~p~~vvInE~V~lak~f~~~~~~~fVNaVL~ki  153 (170)
                      ..+          +..+|+++|+++++++|||+|+||+.+ .++|++|+|||||+|||.|+++++++|||||||++
T Consensus        76 ~~~~~~~~~~i~~~~~~w~~~Ri~~vd~aILrla~~El~~-~d~p~~v~InEavelak~f~~~~~~kfiNgvLdki  150 (151)
T 1q8c_A           76 EEQQLKNQLEIQTKYNKISGKKIDLLTTAVVLCALSEQKA-HNTDKPLLISEALLIMDHYSQGAEKKQTHALLDKL  150 (151)
T ss_dssp             HHHHHHCCCSCCCC--------CCHHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHTTCCCTTSCSCTTTSCC
T ss_pred             HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC-CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHH
T ss_conf             7777888999988752797877349999999999999843-69996412999999999868885177999999851