HHsearch results for GI: 254780345 and protein with PDBid: 1q8c_A
>1q8c_A Hypothetical protein Mg027; structural genomics, NUSB, GI 3844637, BSGC structure funded by NIH, protein structure initiative, PSI; 2.00A {Mycoplasma genitalium} SCOP: a.79.1.2
Probab=99.96 E-value=1e-29 Score=197.40 Aligned_cols=135 Identities=21% Similarity=0.217 Sum_probs=106.3
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 79981323469999999999999956999899999999853100132211201443439999999999999899999999
Q gi|254780345|r 8 KDLKLSHRRGIARLAAVQALYQIDIIGCSTTEIISEYETYRFCADTELDVESVYLHVDLEWFRVIIHGVMDRKQHIDLLI 87 (170)
Q Consensus 8 ~~~~~~~~r~~aR~~aiq~Ly~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~d~~~~~~lv~~v~~~~~~id~~I 87 (170)
+++.....|+.+|+.|+|+|||+++++.+..+.+..+..... .....+..|.+.++.++..+...++..+
T Consensus 6 k~~~~k~tR~~aRe~avQ~Lyq~~~~~~~~~e~i~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~i~~~i 75 (151)
T 1q8c_A 6 KGLTNKLTRTQRRIAVVEFIFSLLFFLPKEAEVIQADFLEYD----------TKERQLNEWQKLIVKAFSENIFSFQKKI 75 (151)
T ss_dssp ------CCHHHHHHHHHHHHHHHGGGCCCCHHHHHHHHHHTC----------CTTTCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH----------CCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 545545249999999999999988288424889999998610----------0012567899998999999999999986
Q ss_pred HHH----------HCCCCCHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHH
Q ss_conf 974----------103576332353489999999999864355781033988999999833877231499999999
Q gi|254780345|r 88 SSC----------LTEKWSFSRLDMILCSILRAGVLELIECHSVPVEVIISEYVCIAHDFFYGDEPKFINAVLDKV 153 (170)
Q Consensus 88 ~~~----------l~~~w~~~rl~~~~~~iLr~a~~El~~~~~~p~~vvInE~V~lak~f~~~~~~~fVNaVL~ki 153 (170)
..+ +..+|+++|+++++++|||+|+||+.+ .++|++|+|||||+|||.|+++++++|||||||++
T Consensus 76 ~~~~~~~~~~i~~~~~~w~~~Ri~~vd~aILrla~~El~~-~d~p~~v~InEavelak~f~~~~~~kfiNgvLdki 150 (151)
T 1q8c_A 76 EEQQLKNQLEIQTKYNKISGKKIDLLTTAVVLCALSEQKA-HNTDKPLLISEALLIMDHYSQGAEKKQTHALLDKL 150 (151)
T ss_dssp HHHHHHCCCSCCCC--------CCHHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHTTCCCTTSCSCTTTSCC
T ss_pred HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC-CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHH
T ss_conf 7777888999988752797877349999999999999843-69996412999999999868885177999999851