BLAST/PSIBLAST alignment of GI: 254780345 and GI: 227821538 at iteration 1
>gi|227821538|ref|YP_002825508.1| transcription antitermination protein NusB [Sinorhizobium fredii NGR234] Length = 160
>gi|254772651|sp|C3M9I9|NUSB_RHISN RecName: Full=N utilization substance protein B homolog; Short=Protein nusB Length = 160
>gi|227340537|gb|ACP24755.1| N utilization substance protein B [Sinorhizobium fredii NGR234] Length = 160
Score = 152 bits (385), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/156 (48%), Positives = 106/156 (67%), Gaps = 3/156 (1%)
Query: 1 MTIQDNKKDLKLSHRRGIARLAAVQALYQIDIIGCSTTEIISEYETYRFCADTELDVESV 60
MT + + LK +++RG ARLAAVQALYQ++I G EI++E+E +R ELD E+
Sbjct: 1 MTNTPSDQPLKQANQRGAARLAAVQALYQMEIGGTGVLEIVAEFEAHRLG--QELDGET- 57
Query: 61 YLHVDLEWFRVIIHGVMDRKQHIDLLISSCLTEKWSFSRLDMILCSILRAGVLELIECHS 120
YL D WFR I+ GV+ ++ +D LI S L + W+ SRLD + +ILRAG EL+E
Sbjct: 58 YLKADASWFRSIVSGVVRDQRKLDPLIGSALQDDWALSRLDSTVRAILRAGTFELLERKD 117
Query: 121 VPVEVIISEYVCIAHDFFYGDEPKFINAVLDKVSRK 156
VPV VI++EYV IA FF +EPK +NAVLD+++++
Sbjct: 118 VPVAVIVTEYVEIAKAFFEDEEPKLVNAVLDRIAKQ 153