RPSBLAST alignment for GI: 254780345 and conserved domain: pfam01029

>gnl|CDD|144570 pfam01029, NusB, NusB family. The NusB protein is involved in the regulation of rRNA biosynthesis by transcriptional antitermination. Length = 126
 Score =  100 bits (251), Expect = 2e-22
 Identities = 41/138 (29%), Positives = 65/138 (47%), Gaps = 13/138 (9%)

Query: 18  IARLAAVQALYQIDIIGCSTTEIISEYETYRFCADTELDVESVYLHVDLEWFRVIIHGVM 77
            AR  A+QALY ++  G S  E++ +              E+     D  +   +++GV+
Sbjct: 2   NARELALQALYAVEERGASLNELLDKLL------------EADLDERDRAFATELVYGVL 49

Query: 78  DRKQHIDLLISSCLTEKWSFSRLDMILCSILRAGVLELIECHSVPVEVIISEYVCIAHDF 137
              + +D LI+  L E W   RLD +  +ILR    EL+    +P  V I+E V +A  F
Sbjct: 50  RNLEELDALIAK-LLENWPLERLDPVDRAILRLAAYELLYLDDIPPHVAINEAVELAKKF 108

Query: 138 FYGDEPKFINAVLDKVSR 155
                  F+N VL K++R
Sbjct: 109 GGEKSAGFVNGVLRKIAR 126