RPSBLAST alignment for GI: 254780345 and conserved domain: pfam01029
>gnl|CDD|144570 pfam01029, NusB, NusB family. The NusB protein is involved in the regulation of rRNA biosynthesis by transcriptional antitermination. Length = 126
Score = 100 bits (251), Expect = 2e-22
Identities = 41/138 (29%), Positives = 65/138 (47%), Gaps = 13/138 (9%)
Query: 18 IARLAAVQALYQIDIIGCSTTEIISEYETYRFCADTELDVESVYLHVDLEWFRVIIHGVM 77
AR A+QALY ++ G S E++ + E+ D + +++GV+
Sbjct: 2 NARELALQALYAVEERGASLNELLDKLL------------EADLDERDRAFATELVYGVL 49
Query: 78 DRKQHIDLLISSCLTEKWSFSRLDMILCSILRAGVLELIECHSVPVEVIISEYVCIAHDF 137
+ +D LI+ L E W RLD + +ILR EL+ +P V I+E V +A F
Sbjct: 50 RNLEELDALIAK-LLENWPLERLDPVDRAILRLAAYELLYLDDIPPHVAINEAVELAKKF 108
Query: 138 FYGDEPKFINAVLDKVSR 155
F+N VL K++R
Sbjct: 109 GGEKSAGFVNGVLRKIAR 126