RPSBLAST alignment for GI: 254780345 and conserved domain: TIGR01951

>gnl|CDD|162621 TIGR01951, nusB, transcription antitermination factor NusB. A transcription antitermination complex active in many bacteria was designated N-utilization substance (Nus) in E. coli because of its interaction with phage lambda protein N. This model represents NusB. Other components are NusA and NusG. NusE is, in fact, ribosomal protein S10. Length = 129

 Score =  127 bits (322), Expect = 1e-30
 Identities = 56/141 (39%), Positives = 80/141 (56%), Gaps = 12/141 (8%)

Query: 16  RGIARLAAVQALYQIDIIGCSTTEIISEYETYRFCADTELDVESVYLHVDLEWFRVIIHG 75
           R  AR  A+QALYQ ++ G    EII E     F  + ELD E      D E+F  ++ G
Sbjct: 1   RRKARELALQALYQWELSGNDVEEIIEE-----FLEERELDEE------DREYFLELVRG 49

Query: 76  VMDRKQHIDLLISSCLTEKWSFSRLDMILCSILRAGVLELIECHSVPVEVIISEYVCIAH 135
           V++ ++ ID LIS  L + WS  RLD +  +ILR    EL+    VP +V+I+E V +A 
Sbjct: 50  VLENQEEIDELISPHL-KDWSLERLDPVDRAILRLAAYELLYRPDVPYKVVINEAVELAK 108

Query: 136 DFFYGDEPKFINAVLDKVSRK 156
            F   D  KF+N VLDK++++
Sbjct: 109 KFGDEDSHKFVNGVLDKIAKE 129