HHsearch alignment for GI: 254780346 and conserved domain: COG1731

>COG1731 Archaeal riboflavin synthase [Coenzyme metabolism].
Probab=97.79  E-value=0.00021  Score=48.28  Aligned_cols=129  Identities=19%  Similarity=0.210  Sum_probs=87.7

Q ss_pred             CCEEEEEEECHHHHHHHHHHHHHHHHHHHC--CCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCH
Q ss_conf             871799980312899999999999999987--995555530014422699999986331137853566541200066524
Q gi|254780346|r    5 IPHVLIIEARFYENLSAMLFEGCVNVLHSR--AVQWSSIVTPGVLEIPAAVSMVMNAKTRSVTYDGIIVLGVVMRGKTAH   82 (149)
Q Consensus         5 ~~kI~IV~s~~~~~i~~~ll~ga~~~l~~~--~~~~~~i~VPGa~EiP~a~~~~~~~~~~~~~~D~vIaLG~VIkGeT~H   82 (149)
T Consensus         1 ~~kvGiaDTTFaR---vdMg~vai~~lk~~~~~~~i~R~TVPGIKdlpvaakrLiee----eGCd~Vi~lG~~--G~t~~   71 (154)
T COG1731           1 MTKVGIADTTFAR---VDMGSVAIDELKKLLPGIKIKRYTVPGIKDLPVAAKRLIEE----EGCDIVIALGWV--GPTEK   71 (154)
T ss_pred             CCEEEEECCCEEE---ECCHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHH----CCCCEEEECCCC--CCCHH
T ss_conf             9625541350123---20147799999963899834886279844375899998876----188489983676--85014


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
Q ss_conf             6789999999999999743997056542558899999950656574569999999999999
Q gi|254780346|r   83 CDVIAHAVTRGLVDLSINGSLPIGNGIVVVDSEQQAFDRVSPSHLDRGGCAARSALAMIEL  143 (149)
Q Consensus        83 ~e~I~~~v~~gl~~lsl~~~~PI~~gILt~~n~~QA~~R~~~~~~nkG~eaa~Aal~mi~l  143 (149)
T Consensus        72 Dk~~~~~aS~GLi~~QlmTn~hiidV~VHE-DEa~dekeL~~la~~RareHa~Nlv~ll~~  131 (154)
T COG1731          72 DKYSYLAASIGLIMAQLMTNKHIIDVTVHE-DEAEDEKELKELAVDRAREHAENLVKLLFK  131 (154)
T ss_pred             HHHHHHHHHHHHHHHHHHCCCEEEEEEEEC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             579999985689999998087489999604-454798999999999999999999999868