HHsearch alignment of GI: 254780346 and MMDB domain: 2fn9_A_1-106_247-290
>2fn9_A (A:1-106,A:247-290) Ribose ABC transporter, periplasmic ribose- binding protein; RBP, periplasmic binding protein, thermophilic proteins; 1.40A {Thermotoga maritima MSB8} PDB: 2fn8_A*
Probab=91.24 E-value=1.2 Score=24.67 Aligned_cols=87 Identities=13% Similarity=0.096 Sum_probs=57.4
Q ss_pred CCCEEEEEEECHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHH-HHHHHHHHHHHCCCCCCEEEEEEEEECCCCCH
Q ss_conf 58717999803128999999999999999879955555300144226-99999986331137853566541200066524
Q gi|254780346|r 4 FIPHVLIIEARFYENLSAMLFEGCVNVLHSRAVQWSSIVTPGVLEIP-AAVSMVMNAKTRSVTYDGIIVLGVVMRGKTAH 82 (149)
Q Consensus 4 ~~~kI~IV~s~~~~~i~~~ll~ga~~~l~~~~~~~~~i~VPGa~EiP-~a~~~~~~~~~~~~~~D~vIaLG~VIkGeT~H 82 (149)
|+.+|++|........-..+++|+.+.++++|+........+.-+-- ..++.++ ...+||+|..+.--.+-+
T Consensus 1 mK~~Igvi~~~~~~~f~~~i~~gie~aa~~~G~~v~l~~~~~d~~~~~~~i~~l~-----~~~vdgIIi~~~~~~~~~-- 73 (150)
T 2fn9_A 1 MKGKMAIVISTLNNPWFVVLAETAKQRAEQLGYEATIFDSQNDTAKESAHFDAII-----AAGYDAIIFNPTDADGSI-- 73 (150)
T ss_dssp --CEEEEEESCSSSHHHHHHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHH-----HTTCSEEEECCSCTTTTH--
T ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHH-----HCCCCEEEEECCCCCCHH--
T ss_conf 9998999948998989999999999999985998999968999899999999999-----659986987315652149--
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCEE
Q ss_conf 6789999999999999743997056
Q gi|254780346|r 83 CDVIAHAVTRGLVDLSINGSLPIGN 107 (149)
Q Consensus 83 ~e~I~~~v~~gl~~lsl~~~~PI~~ 107 (149)
...+-..+.++|+..
T Consensus 74 ----------~~i~~l~~~gIPvV~ 88 (150)
T 2fn9_A 74 ----------ANVKRAKEAGIPVFC 88 (150)
T ss_dssp ----------HHHHHHHHTTCCEEE
T ss_pred ----------HHHHHHHHCCCCCEE
T ss_conf ----------999999975996256