HHsearch alignment of GI: 254780346 and MMDB domain: 2fn9_A_107-246
>2fn9_A (A:107-246) Ribose ABC transporter, periplasmic ribose- binding protein; RBP, periplasmic binding protein, thermophilic proteins; 1.40A {Thermotoga maritima MSB8} PDB: 2fn8_A*
Probab=90.49 E-value=1.4 Score=24.24 Aligned_cols=100 Identities=8% Similarity=-0.069 Sum_probs=74.0
Q ss_pred CEEEEEEECHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCHHHH
Q ss_conf 71799980312899999999999999987995555530014422699999986331137853566541200066524678
Q gi|254780346|r 6 PHVLIIEARFYENLSAMLFEGCVNVLHSRAVQWSSIVTPGVLEIPAAVSMVMNAKTRSVTYDGIIVLGVVMRGKTAHCDV 85 (149)
Q Consensus 6 ~kI~IV~s~~~~~i~~~ll~ga~~~l~~~~~~~~~i~VPGa~EiP~a~~~~~~~~~~~~~~D~vIaLG~VIkGeT~H~e~ 85 (149)
.||+++.+.-.......-.+|+.+.+.+++.......+++.+....+.+..........++|++++. .|.
T Consensus 26 ~~i~~i~g~~~~~~~~~R~~gf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~----------nd~ 95 (140)
T 2fn9_A 26 IPYAELLGILSAQPTWDRSNGFHSVVDQYPEFKMVAQQSAEFDRDTAYKVTEQILQAHPEIKAIWCG----------NDA 95 (140)
T ss_dssp EEEEEEECCTTCHHHHHHHHHHHHHHTTSTTEEEEEEEECTTCHHHHHHHHHHHHHHCTTCCEEEES----------SHH
T ss_pred CCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEC----------CCC
T ss_conf 5146513887750578999899999865145562268833300278999999998513222236765----------761
Q ss_pred HHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHH
Q ss_conf 99999999999997439970565425588999999
Q gi|254780346|r 86 IAHAVTRGLVDLSINGSLPIGNGIVVVDSEQQAFD 120 (149)
Q Consensus 86 I~~~v~~gl~~lsl~~~~PI~~gILt~~n~~QA~~ 120 (149)
++..+.+.|.+...+ =..|++.++...+..
T Consensus 96 ~a~g~~~al~~~g~~-----di~vig~d~~~~~~~ 125 (140)
T 2fn9_A 96 MALGAMKACEAAGRT-----DIYIFGFDGAEDVIN 125 (140)
T ss_dssp HHHHHHHHHHHTTCT-----TCEEECCBCCHHHHH
T ss_pred CCHHHHHHHHHHCCC-----CCCCCCCCCCHHHHH
T ss_conf 003389999973746-----753136879899999