HHsearch alignment of GI: 254780346 and MMDB domain: 3jvd_A_1-157_286-333
>3jvd_A (A:1-157,A:286-333) Transcriptional regulators; structural genomics, PSI-2, sugar binding protein, transcription regulation, protein structure initiative; 2.30A {Corynebacterium glutamicum}
Probab=91.18 E-value=1.2 Score=24.63 Aligned_cols=102 Identities=21% Similarity=0.205 Sum_probs=73.8
Q ss_pred CCEEEEEEECHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEE--------
Q ss_conf 871799980312899999999999999987995555530014422699999986331137853566541200--------
Q gi|254780346|r 5 IPHVLIIEARFYENLSAMLFEGCVNVLHSRAVQWSSIVTPGVLEIPAAVSMVMNAKTRSVTYDGIIVLGVVM-------- 76 (149)
Q Consensus 5 ~~kI~IV~s~~~~~i~~~ll~ga~~~l~~~~~~~~~i~VPGa~EiP~a~~~~~~~~~~~~~~D~vIaLG~VI-------- 76 (149)
...|+++...++......++.|+.+.+.++|+..-.......-+--.+++.+.. .++||+|..+.+-
T Consensus 64 s~~Igviip~~~npff~~ii~gi~~~a~~~g~~lii~~~~~~~~~~~~le~l~~-----~~vdGIIi~p~i~~l~~~~iP 138 (205)
T 3jvd_A 64 SALVGVIVPDLSNEYYSESLQTIQQDLKAAGYQMLVAEANSVQAQDVVMESLIS-----IQAAGIIHVPVVGSIAPEGIP 138 (205)
T ss_dssp CCEEEEEESCSSSHHHHHHHHHHHHHHHHHTCEEEEEECCSHHHHHHHHHHHHH-----HTCSEEEECCCTTCCC-CCSC
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCC-----CCCCCCCCCCCCCCCCCCCCC
T ss_conf 617766511345633666666678787764301233333221012332200222-----110112467621000002453
Q ss_pred --------CCC------CCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC
Q ss_conf --------066------524678999999999999974399705654255
Q gi|254780346|r 77 --------RGK------TAHCDVIAHAVTRGLVDLSINGSLPIGNGIVVV 112 (149)
Q Consensus 77 --------kGe------T~H~e~I~~~v~~gl~~lsl~~~~PI~~gILt~ 112 (149)
.+. ++| |-+..+..+-|.++--+-++|.+--+|.-
T Consensus 139 vV~Id~~~~~~~~~sV~~D~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (205)
T 3jvd_A 139 MVQLTRGELGPGFPRVLCDH-EEMGKEAVRLLVDLIENPELPTGDVVLQG 187 (205)
T ss_dssp EEEECC----CCSCEEEECH-HHHHHHHHHHHHHHHHSCC--CCCEEECC
T ss_pred EEEECCCCCCCCCCEEEECH-HHHHHHHHHHHHHHHCCCCCCCCEEEECC
T ss_conf 25650456789998899569-99999999999999639899984799848